| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1778 |
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| Symbol | |
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| ID | 8323871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1863240 |
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| End bp | 1864916 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952908 |
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| Product | trehalose synthase |
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| Protein accession | YP_003110365 |
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| Protein GI | 256372541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAAC ACCGGTTCGC CTCGCTGCGG GGCGCCGAGG GCGAGCCCGC GTGGTACCAG
CAAGCGGTCT TCTACGAGGT GCTGATCCGC GGGTTCTACG ACTCGAACGA CGACGGCGTC
GGTGACCTCC GAGGCCTCAT CGAGAAGCTC GACTACCTCG AGTGGCTCGG GGTGGACTGC
TTGTGGCTGC TCCCGTTCTA CGAGTCGCCG CTGCGCGACG GTGGCTACGA CGTCGCTGAC
TTCACCAAGG TCCATCCCGA CCTTGGCACC CTCGACGACC TTGCCGAGCT GCTTCGGGAG
GCGCACCTGC GCGGGATGCG CGTGATCGCC GATCTCGTGC TGAACCACAC GAGCGACCAG
CACCCATGGT TCGTGGAGTC GCGCTCGTCG CGCGACAATC CGAAGGCGGA CTGGTACGTG
TGGTCGGACA CGGACGACGG GTATCGCGAC GCCCCGATCA TCTTCGTCGA TACCGAGTCG
TCGAACTGGT CGTGGGCGCC AGAACGCGAA CAGTACTACT GGCATCGGTT CTTCTCTCAT
CAGCCCGATC TGAACTACGA GAACCCGGCG GTGCAAGAGG CGATGCTGGA GATCGTGCGC
TACTGGCTGG CGTTTGGCGT CGACGGTTTT CGCCTCGATG CGGTCCCGTA TCTCTTCGAG
GCCGAGGGGA CGCGCTGTGA GAACCTTCCC GGTACCCACG CGTTCCTTCG CCGGATCAGG
GCGCTCGTCG ATGCCGAGTT TCCCGACGCG GTGCTGCTCG CCGAGGCGAA CCAGCCTCCG
GCCCAGGTCG TTGAGTACTT CGGCCAGGGC GACGAGTGCC ACATGTGCTT CCACTTCCCG
CTCATGCCGA GGCTGTTCAT GGCGGTGAAG CAGGAGAGTG CGCAGCCGAT TCGCGACGCC
ATCGCCGAGA CCCCACCGAT CCCGCCGCGG TGCCAGTGGG GCATCTTCCT GCGTAACCAC
GACGAACTCA CCCTCGAGAT GATCTCCGAA GAGGACCGCG TCTTTCTCTG GGCGGCCTTC
GCGTCCGATC CCATCGCGCG ACGCAACGTT GGCATCGGTC GGCGCCTCGC GCCCCTCATC
GAGAACGATC GTCGCGTGGC CGAACTCCTC CACGCGCTCC TGCTGTCGCT GCCGGGCTCA
CCGGTGCTCT ACTACGGCGA CGAGATCCTG ATGGGGGACA ACGTCTACCT CGGCGATCGC
GACTCGGTGC GTACCCCCAT GCAGTGGTCG CCCGATCGTA ACGGCGGGTT CTCGCGCGCC
GATCCCCAGC GCCTCTACCT CGCCCCGATC ACCGACCCGG TCTATGGCTA CCAGGTCGTC
AATGTCGAAT CGCAGATGCG CAACCCGTCG TCGTTCCTCA GATGGCTGCG CGAGCTCCTG
CTCGCGCGTC GCCAGGAGGG AGTCTTTGGT GACGGTACCT TCGAGCTGCG CGACGTCGAC
AATCCGGCGA TCTTGGCCTA CCTCCGCTTC GACGAGGAGC ACGAGCGGGT CGTGGCCTGC
GTGAGCAATC TGTCCTCGAA GGCTCAGCCC TGCCGCCTCG ATCTTCGTGG GTTCGAGGGC
TTTGTGCCGG TGGAGCTGCT CGGCATGACC CCATTTCCTG AGGTCCCAGC CGACGGAGGC
TACCCACTGA CGCTCGCGCC GTACGGGTTC TTGTGGTTCG AGCTCTCGGA AGCGTGA
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| Protein sequence | MAQHRFASLR GAEGEPAWYQ QAVFYEVLIR GFYDSNDDGV GDLRGLIEKL DYLEWLGVDC
LWLLPFYESP LRDGGYDVAD FTKVHPDLGT LDDLAELLRE AHLRGMRVIA DLVLNHTSDQ
HPWFVESRSS RDNPKADWYV WSDTDDGYRD APIIFVDTES SNWSWAPERE QYYWHRFFSH
QPDLNYENPA VQEAMLEIVR YWLAFGVDGF RLDAVPYLFE AEGTRCENLP GTHAFLRRIR
ALVDAEFPDA VLLAEANQPP AQVVEYFGQG DECHMCFHFP LMPRLFMAVK QESAQPIRDA
IAETPPIPPR CQWGIFLRNH DELTLEMISE EDRVFLWAAF ASDPIARRNV GIGRRLAPLI
ENDRRVAELL HALLLSLPGS PVLYYGDEIL MGDNVYLGDR DSVRTPMQWS PDRNGGFSRA
DPQRLYLAPI TDPVYGYQVV NVESQMRNPS SFLRWLRELL LARRQEGVFG DGTFELRDVD
NPAILAYLRF DEEHERVVAC VSNLSSKAQP CRLDLRGFEG FVPVELLGMT PFPEVPADGG
YPLTLAPYGF LWFELSEA
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