Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1576 |
Symbol | |
ID | 8323667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1657259 |
End bp | 1657951 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952713 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003110171 |
Protein GI | 256372347 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.546298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCGG TCCTGGTGGT CGAGGACGAT CCGAACATCG TGGACCTGAT CCGTGCGAAT CTTCTCGTGC GCGGCTATCA GGTCGCGGCC GCTTCCGACC GGTCGGAAGC GTTGGCTGCG CTCGAAGCAC GGCGGCCGGA GATCATCCTG CTCGACCTCA TGATCCCCGG CGTCGAGAGC TTCGAGCTGT GCTACGAGAT TCGCGAGCGC ACCTCCGCGG GACTCATCGT GGTGTCAGCA CGGCGTGGCG AGCAGGACAA GGTGACGGCA CTGAACGCGG GCGCTGACGA TTACCTCACC AAACCCTTCG GCATCGAAGA GCTGATGGCG AGGATCACGG CGACGCTCCG GCGAACGCGA CCCGCGGCGA GCCAGTCCGA CAAGGGCACG ATCGTCTTAC GCCCGGGTCT CGTGGTCGAT CTCGAACGTC AGCTCGTCGA GCGAGATGGT GTGCCAGTGC ACCTGACGCC AACCGAGTTT GCGTTGCTCG CCGAACTCAT CCGTGGCGAC GGTCGGCTGC TGTCGCACGC GGCGTTGTTG CGTGCGGTGT GGGGTCGCGG TTACGAGACC GAGACTGAGT ACCTTCGCGT CTACATCCGG CGCCTCAGGG CCAAGCTCGA GGCGCCCGGG GACGCACCGT TGATCCTCAC GCAACCGCGT GCTGGCTATC GGCTGGTGCG GGACGCGGCG TAA
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Protein sequence | MTSVLVVEDD PNIVDLIRAN LLVRGYQVAA ASDRSEALAA LEARRPEIIL LDLMIPGVES FELCYEIRER TSAGLIVVSA RRGEQDKVTA LNAGADDYLT KPFGIEELMA RITATLRRTR PAASQSDKGT IVLRPGLVVD LERQLVERDG VPVHLTPTEF ALLAELIRGD GRLLSHAALL RAVWGRGYET ETEYLRVYIR RLRAKLEAPG DAPLILTQPR AGYRLVRDAA
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