| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1534 |
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| Symbol | |
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| ID | 8323620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1606879 |
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| End bp | 1608285 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952667 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003110130 |
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| Protein GI | 256372306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.706683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA CGCTCGTCGA CAAGATTTGG GATGCGCATG TCGTCGCCCA GGGAACCGAG
GACGAACCGG ACCTGCTCTA CGTCGACCTG CACCTCGTGC ACGAGGTCAC CTCGCCGCAG
GCCTTCGACG GGCTGCGCGC TGCGGGTCGT CGGGTACGAC GCCCTGACCT CACGGTCGCG
ACGGCGGACC ACAACGTGCC GACGGTCGGC ATCGACCAGC CGATCGCCGA CCCGATCTCG
GCGGCGCAGC TGGATGCACT CGCGACGAAC TGTGCCGAGT TCGGGATCTC GTACTTCCCG
ATGGGGTCCC AGAACCAGGG CATCGTGCAC GTCATCGGTC CGGAATTGGG ACTGACGCAG
CCAGGGATGA CCATCGTGTG CGGCGACTCG CACACCGCGA CCCACGGTGC CTTCGGCGCG
CTCGCCTTCG GTATCGGCAC CAGCGAAGTC GAGCACGTCC TCGCCACGCA GACGCTCCCG
CAACGTCGAC CGCGCACACT CGCGATCGAG GTCGAGGGCA CCTTGGCCGA GTCGGCGAGT
GCGAAGGACC TCATCCTCGC GGTGATCGGC CAGATCGGTA CCGGCGGAGG GATCGGACAC
GTCATCGAAT ATCGCGGTGA GGCGATCCGT CGGCTGTCGA TGGAGGCTCG CATGACGGTC
TGCAACATGA CCATCGAGGC CGGTGCGCGT GCGGGCCTGA TCGCCCCGGA CGATGTGACC
TTCGCGTATC TCGAAGGTCG CCCGTACGCC CCGCGTGGCC GGGCCTTCGA CGAGGCCGTG
TCTGCATGGC GAGCGCTCGC GACGGATCCG GACGCGGTCT TCGATCGCGT CGTTCGCATC
GACGCCTCGA CGCTCACCCC TCGAGTGAGC TGGGGCACGA ACCCCTCGCA GGTCATCGGT
GTCGATGACG TCGTTCCCGA CCCTTCGTCG TTCACGACCG AGCACGAGCG CCAAGCAGCC
GAGCGAGCGC TCGCCTACAT GGGGCTCGAG CCCGGGACGC CGATGCGAGA GGTGCCCGTC
GACGTCGTCT TCATCGGCTC GTGCACGAAC GCCCGTCTCG AGGACCTCCG GGTCGTCGCG
AGCGTGGCGC GTGGACGACG GGTCGCCCCG GGCGTGCAGG CGCTCGTGGT GCCGGGGTCA
CGGCGCGTCA AGGAGGCGGC CGAGGCCGAA GGCATCGACC GCGTCTTGGT CGCTGCTGGT
TTCGAGTGGC GCGAACCAGG CTGCTCGATG TGTCTTGGGA TGAACCCCGA TCAGCTCCGG
CCTGGTCAGC GCTCTGCGTC GACCTCGAAC CGCAACTTCG AGGGCCGCCA GGGTCGCGGC
GGACGAACCC ATCTCGTGTC GCCTGCCGTG GCGGCTGCGA CGGCACTGGC GGGCCACTTT
GCCACACCGG CGGACGTGGA GGGCTGA
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| Protein sequence | MSTTLVDKIW DAHVVAQGTE DEPDLLYVDL HLVHEVTSPQ AFDGLRAAGR RVRRPDLTVA
TADHNVPTVG IDQPIADPIS AAQLDALATN CAEFGISYFP MGSQNQGIVH VIGPELGLTQ
PGMTIVCGDS HTATHGAFGA LAFGIGTSEV EHVLATQTLP QRRPRTLAIE VEGTLAESAS
AKDLILAVIG QIGTGGGIGH VIEYRGEAIR RLSMEARMTV CNMTIEAGAR AGLIAPDDVT
FAYLEGRPYA PRGRAFDEAV SAWRALATDP DAVFDRVVRI DASTLTPRVS WGTNPSQVIG
VDDVVPDPSS FTTEHERQAA ERALAYMGLE PGTPMREVPV DVVFIGSCTN ARLEDLRVVA
SVARGRRVAP GVQALVVPGS RRVKEAAEAE GIDRVLVAAG FEWREPGCSM CLGMNPDQLR
PGQRSASTSN RNFEGRQGRG GRTHLVSPAV AAATALAGHF ATPADVEG
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