| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1505 |
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| Symbol | |
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| ID | 8323589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1570853 |
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| End bp | 1571410 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952636 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003110101 |
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| Protein GI | 256372277 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00989017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGACCG ACGACGCGCA ACGCGAGTCC GTCGACATCG ATCGCCTCCG TACAGGCGAC
CCGGACGAAT TCGGGCGATG GGTACGTCAC GTTGGCCCGG CCCTACGAGG ATTCCTCCGC
GCCTCAGGAG TTGCAGACGT CGACGACATC CTGCAGGATG TGTGGCTTCG GCTGGTCCGT
TCTCTCAGTC GCTTCGACGG CGACGAAGAC GGTTTACGCC GCCTGACGTT CACGATCGCC
TATCGATCGC GTGCGGATGC ACTACGCGCG CTTGGACGGC GCCGCGAGGT CGCTTTCGAT
CCTGCCGAAC TCCCACATCC GACGTTGTCG CCGGAGGACA TCGATGACGG CACCGTCACA
GCCCTCCTCA GACGGCTACC GGAGCAGCAA GCGCTCGTGA TCGGCCTTCG TGTCTTCGGC
GGCTTCGCTG CCACTGAGGT AAGCGACATG CTCGGGATAC CCGATGCGAC CGTACGGAGC
CTCGCACATC GGGGACTCAA GGCCATGGCA CGGCTCCTCG AGCAACAATC CCCGTCGTCG
CTGGAGGCAC CCTCGTGA
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| Protein sequence | MSTDDAQRES VDIDRLRTGD PDEFGRWVRH VGPALRGFLR ASGVADVDDI LQDVWLRLVR
SLSRFDGDED GLRRLTFTIA YRSRADALRA LGRRREVAFD PAELPHPTLS PEDIDDGTVT
ALLRRLPEQQ ALVIGLRVFG GFAATEVSDM LGIPDATVRS LAHRGLKAMA RLLEQQSPSS
LEAPS
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