Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1487 |
Symbol | |
ID | 8323570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1557180 |
End bp | 1558706 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952618 |
Product | transposase IS4 family protein |
Protein accession | YP_003110083 |
Protein GI | 256372259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0024926 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGCA CCGAATCAGA CCAGGCACAC CTCACCGCGA CGGAGGCCTT CTGCTCCTCG CTCATCGAGC CAGGGTCCAT CTACGCCTTC CTCGCCGAGC ACCGCAGAGA GCTCTTCCCC GACGAGCGCT TCCGCCATCT CTACCCCTCC ACGACCGGCA GACCCTCCAT CCCCGCCTCG AGGGTGCTCG CGGTCATGGT GCTCCAGGTG CTCGAGGGGC TCTCGGACAC CGAGGCGACA GAGCAGGTCC GCTACAACCT CCGCTGGAAG TACGCCCTTG GTCTTGATCT CGAGGACCCA GGCTTTCACC CCACGGTGCT CACCTACTGG CGCAGGCGCA TCGCCACCTC CGAGACCCCA AGACTCATCG GCGAACTCGT GGCCGAGGTG ATCGGTGCCA CGGGGGTGCT CAAGGGCAAG ACGAAGCGCG TCGTCGACTC CACCGTGCTC GCCGATGCGG TTGCCACCCA AGACACCATG ACCCAACTTG TCGCCCAGAT CAACCGGGTA CGCAGGCTGA TCCCCGAACT ACGCGACATT CCTCTGTCAC CAGCGATCGA CTACACCCGC GCAAAGCCTG CCATCGACTA TCGGGACGAA GAGGCAGTGG TGCGCACGGT GAGTGCCCTC GTCGCCGATG CCACTGCCCA CCTCGCCCAT GCAGAGAAGC TCGCATCCCT CACCGAGCCA CAGACCGAAG CCCTTGGTCT CCTTGGGCTC GTGGCGGGCC AAGACGTGGA GTGTGTCGAT GCCAAGGAAG GTCGCTGGCG CATCGCGAGG CGGGTAGCCA CAGACAGGGT CATCTCCACC GTGGACCCTG ACGCTCGCCA CGTCCACAAG TCCCGTGCCC GTGCCATCGA TGGCTACAAG GGCCACGTGG CCGTCGAGCC AGACAGTGGC ATCGTCACCG CTGCGACCAT CACGAAGGGC ACCGTGCCGG ACGCAGCAGT GGCGAGCGAG CTCCTTCGTG ACGAGGACGG CCCGCGCACG GTCTATGGCG ACAGCGCCTA TGCCACGAGC GAGGTCTCCA ACGAGCTCGC CGCTCGTGGC CACGACGAGG TGATCAAGCC TCGGCCCCTT GCCATGGCGG TCCCTGGTGG CTTCACCATC GATGACTTCG TCGTCGAGGA GGGATGGGTC AGCTGTCCCC AAGGACACCG AGTACCCATC TCCGCCAAGG GTCGTGCTTC CTTTGTCAAG CACTGCACCG GCTGTCCGCT CCGGGATCGC TGCACGCGCT CGAAGCGAGG ACGGGTCCTC ACCTTCACCC CTGCCACCTG GCACGCAATC AGCCAGCGGG CGCACTTTGG GGACCCTGCC GTTCGTCTCG ACTATCAGCG CACCCGACCG AACGTCGAGC GGATCCACGC ACAGCTCAAA CGCAAGCTCT CCGGCGCGAG GCTGCGCTAC CTGGGGCTCG TGCGCAACCG ACTCCACTTC GAGCTGCTCT GTGCCACCTG GAACCTGAAG GTGCTCCTTC GCCTGGGGCT CACCCGGGTG GGTGGTGGCT GGGTGCTTGC CACCTGA
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Protein sequence | MLGTESDQAH LTATEAFCSS LIEPGSIYAF LAEHRRELFP DERFRHLYPS TTGRPSIPAS RVLAVMVLQV LEGLSDTEAT EQVRYNLRWK YALGLDLEDP GFHPTVLTYW RRRIATSETP RLIGELVAEV IGATGVLKGK TKRVVDSTVL ADAVATQDTM TQLVAQINRV RRLIPELRDI PLSPAIDYTR AKPAIDYRDE EAVVRTVSAL VADATAHLAH AEKLASLTEP QTEALGLLGL VAGQDVECVD AKEGRWRIAR RVATDRVIST VDPDARHVHK SRARAIDGYK GHVAVEPDSG IVTAATITKG TVPDAAVASE LLRDEDGPRT VYGDSAYATS EVSNELAARG HDEVIKPRPL AMAVPGGFTI DDFVVEEGWV SCPQGHRVPI SAKGRASFVK HCTGCPLRDR CTRSKRGRVL TFTPATWHAI SQRAHFGDPA VRLDYQRTRP NVERIHAQLK RKLSGARLRY LGLVRNRLHF ELLCATWNLK VLLRLGLTRV GGGWVLAT
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