| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1458 |
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| Symbol | |
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| ID | 8323541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1526496 |
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| End bp | 1527896 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952589 |
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| Product | Amidase |
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| Protein accession | YP_003110054 |
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| Protein GI | 256372230 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.249504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGACG TGCTCTCCCC GTTCACCCCC GTCACGATCG ATCGAACCCG AACCGAGTTC
CCCGGTATCG GAGCGGCCTG GCGCGCGCAC GCGCTCCGGA TCGACGATCG CCTCGGCCTC
CATGCGCTCG CTGCAATCGC CGACGACCCG CAGCCAGCTG CGCACGGACC ACTCGCAGGC
GTGCCGGTTC TCGTCAAGGA CACCATCGAC ACTGCCGATC TCTCCACGAC GGCCGGCTCC
CTCGTCCTAC CCGAAGAGCC CCCTGCTACT GACGCCTGGA TCGTGGATGC GCTGCGCGCC
GCTGGTGCGA CCATCGCCGC CAAGACCACC TGTTCAGAGT GGGCGAACTT TCGCGGCGAG
GGATCCATAT CCGGGTGGAA TGCGCGCTAC GGACTCGCCC GTAACCCCTA CGACCCGACG
CGCTCGGCTG GGGGCTCGTC GAGCGGCTCG GCCATCGCCG TCGCGGCTGG CATGAGCCCG
ATCGCGATCG GTACCGAGAC TGATGGGTCG ATGCTCTGCC CGGCATCGCT CAATGGTGTC
ATCGGGTTCA AGACTGCTCC GAAGCGCCTC GACCGGAGCG GCGTCATCCC GATCTCGTCG
ACACAGGACT CCCTCGGCAT CTTCGCCACG AGTGCCGACG ACCTCCTCGT CGTCGCGAGC
GTCCTCGGCA TCGAAGCCAC CACCCTGACA GAACCTGTCC GACTCTGCGT GGTCGAGGAG
TCCCTCAACG GCTTCCATCC TCGTACGCTC GCACGCTTTC ACGACGTCCT CGAGCTGCTC
TCGCGCGCGG GCGTCGACGT CGTGACGCTG AGCGCACCGC CGCGCGGAAC GCTCGAGCCC
TCCGATGAGG ACGAGCTCAT CGTGTTGCGC ACCGAGCTGC ATGTCGAGCT CGATCGCTAC
CTCGATCGTC GCGCCATCCC CGGCCTTCGC TCCCTGGCCG ACGTGGTCGC GGCGAACGAC
GCGCTCGCCG ACCGAGAGCT CGCCTACTTC GGCCAAGAGC ACTTCGTGGC GGCACTCGAG
GCCGACCCGG CCGATCCCGC CTACCGGGCC GCGCGCCAAC GCAACCTCGA GCGCACGACC
GAAGGAATCG AGTCCTCGCT CGCCGCGACG GACGCACTCG CGATCCTCGC ACCAACCATG
GACGTCGCGT GGCCCATCGA TCTGCTCCGC GGCGACCCCA ACTCCCCAGC TGGCTATCGA
GCCGCCGCAG TCGCCGGCGG GACTTCGGTC TCCGTCCCGG CAGGTCGCAT CGGGCACCTC
CCCGTCGGCG TGTGTCTCAG CGCGCCGGCA GGTCACGAGG AAACGATCCT CGAGCTGACG
GCGCTCCTCG AGCGCGCTCT GGCCCCACTC GCGGGCCTCG CGGGACGCGA GAGGCCCACG
ACGCTGTTGC CCGAAGCGTG A
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| Protein sequence | MTDVLSPFTP VTIDRTRTEF PGIGAAWRAH ALRIDDRLGL HALAAIADDP QPAAHGPLAG
VPVLVKDTID TADLSTTAGS LVLPEEPPAT DAWIVDALRA AGATIAAKTT CSEWANFRGE
GSISGWNARY GLARNPYDPT RSAGGSSSGS AIAVAAGMSP IAIGTETDGS MLCPASLNGV
IGFKTAPKRL DRSGVIPISS TQDSLGIFAT SADDLLVVAS VLGIEATTLT EPVRLCVVEE
SLNGFHPRTL ARFHDVLELL SRAGVDVVTL SAPPRGTLEP SDEDELIVLR TELHVELDRY
LDRRAIPGLR SLADVVAAND ALADRELAYF GQEHFVAALE ADPADPAYRA ARQRNLERTT
EGIESSLAAT DALAILAPTM DVAWPIDLLR GDPNSPAGYR AAAVAGGTSV SVPAGRIGHL
PVGVCLSAPA GHEETILELT ALLERALAPL AGLAGRERPT TLLPEA
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