Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1405 |
Symbol | |
ID | 8323487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1467021 |
End bp | 1468199 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644952536 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003110002 |
Protein GI | 256372178 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00776945 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCC GCGTGCTGAT CGTCGGTGGA GGCGACGGGG GCACGATCCT CGCAAACTCG CTCGATCCCC GCCGCTTCGA CGTGACCGTG CTGACCGCCT CACTTGAACA TGTCTTCCAG CGCGGTTACC TCGGCGTCGC CTTCCAGGGG CGGCGTCGCA ACCTCGTGCG CGACGAGCAC AGCTTGCTGC GCTCGCACAT CACACTGATC CACGACACCG CAGTGCGCAT CGACCTGGTT GACCACGAGG TCGAGACCGC GACCGGCAGG CGTCTCGGTT ACGACGACCT CGTCATCGCG ACCGGTGTGC GCACCGATCC GTCCCAGATC CCCGGTCTCT GGGAGATCAA TGAGCGCATC GGCGACTTCC ACTCGACGAC CGCGAATGCG CGTCGCTTGT GGCGCAACCT CAACGCCTTC TCCGGAGGCA CCGTGGCACT CGGACAAGCG AGCCCGATCA TCAAGTGTCC ACCCTCGCCC GTGGAGGGAA TCCTCGGCGT CGACGCACGA CTACGGGCTC GGAGGGTACG GGAGGCGGCG AAGCTCGTGC TGTTCACCCC GTACCCACGC GCGTACCCCG CAGAGCCCAT CAACGAGGTG ATCACGCCGA TTCTCGAGGA GCGAGGTATC GAGGTCATGC CGTTCTTCGA CGTGGATCGG ATCGATCCCG CGACCGGGAC CATCACTTCG CTCGAGGGCG ACGAAGTCAA GGCAGACCTG CCCATCGTCG TACCCCCGTT CGTTGGAGCG CCGATCGTCT ACGAGCCCGC GGACGTCGTC GACGACAATG GACTCGTGAA GACGAACAAG GAGACGCTCG CCGTCGAGGG GGTCGAGCAT GCGTGGTGCA TCGGTGATGC CAACAACGTG CCGACGTCCA AGGCGGGCGT GGGCGCGCAC CTCGAGGCGA AGGTGGTCGC GCGGACACTG GCAGGTCACC CGACGCGCTT CGATGGGCGC ACCAACTGCT CCCTCGAGAT CGTAGGAGAT CGGCGCTTGA CCTTCGTCAT TGGATCTTTC GACGCTCCGG TCGAGAAGCT CCGGCCGACA CGAGTCAAGT ACCTCGAGGA GTGGTTGCTC GGCGAGACGT TCTTCTGGGG CCTTCGGGGC TGGCTGGACC CGGTCTTCGA CGCCTACTTC CGACTGACCG AGCCAAAACC TCGGCGAGTC GCCGCCTGA
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Protein sequence | MTRRVLIVGG GDGGTILANS LDPRRFDVTV LTASLEHVFQ RGYLGVAFQG RRRNLVRDEH SLLRSHITLI HDTAVRIDLV DHEVETATGR RLGYDDLVIA TGVRTDPSQI PGLWEINERI GDFHSTTANA RRLWRNLNAF SGGTVALGQA SPIIKCPPSP VEGILGVDAR LRARRVREAA KLVLFTPYPR AYPAEPINEV ITPILEERGI EVMPFFDVDR IDPATGTITS LEGDEVKADL PIVVPPFVGA PIVYEPADVV DDNGLVKTNK ETLAVEGVEH AWCIGDANNV PTSKAGVGAH LEAKVVARTL AGHPTRFDGR TNCSLEIVGD RRLTFVIGSF DAPVEKLRPT RVKYLEEWLL GETFFWGLRG WLDPVFDAYF RLTEPKPRRV AA
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