| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1247 |
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| Symbol | |
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| ID | 8323321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1302208 |
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| End bp | 1303521 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644952377 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003109851 |
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| Protein GI | 256372027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG ATGCGCTGCG TGCCCAGGTG GCAGGCGGGC GTGTGCTCGT GCTCGGAGCG
AGCGTGTCCG GTCTCGCGGC CGAACGGGTG CTGCGATCGT TGGGCGCCGA GGTCATCGTG
GCGGACGACG CTCGAGCGCT GCGTGACAAG GCGCGCTCCG AGGGGCGTGA GCTCGTGGAT
CCGGACGCCA TCGTTGGCGC GCGCTTCGAC CTGGTCGTCG TGTCCCCCGG GATTCGCACC
GAACGGGTGG AACGTCTCGG GCTCGACGGT CCGGTGATCG GCGAGCTCGA ACTCGGCTAC
CTTCTCGCCG CGGCCCCCAT CACCGCGGTG ACCGGTACCA ACGGGAAGTC CACGGTGACG
ACGCTCACCG CGAGCATGCT CGGCGACGGG GCCGTCGCGG CCGGCAATCT CGGCACGCCA
CTCTCGGCGG TGGCGGACAG TGGCGCTCGT CGACTCGTGG TCGAGGTCTC CTCCTTCCAG
CTCGTCTGGG CCCCGACGTT TCGAGCTTCC GTCGCGACCG TGTTGAACCT CACGCCGAAC
CATCTCGACT ACCACGGGTC GTTCGAGGCC TATCGCGCGG CCAAGGCGCG CCTCATCGAG
CGGCTCGCGC CCGGGGATGT CGCCGTGTGG CCCGTCGGAG AGGGTGCCGT GGACGCCATC
GCGATCCCTC GCGGGGTCGA GGTGCGGACC TTCAGTGCGA CGGCGCGTGA CGCCGACTAT
CGGGTCGAGC ATGGTGCACT CGTCGGGCCG GACGGCCGCA CGCTCGTCCG GGTCGAGGAG
TTGGGACGTC GTGCACCACA CGACGTCGCG AACATGCTGG CGGCCTGGGC GCTTGCGGAG
GCGAGTGGCG CGGAGCTCGA ACGCGCGCGT CGAGTCGCGC GCGAGTTCCG GGGGCTTGCT
CATCGGCTCC AGGTCGTGGC CGTTCGTGGT GGGCTCACCT ACGTGGACGA CTCGAAAGCC
ACGACGCCGG AAGCTGCTGT GGCTGCGGTG AGGAGCTTCG ATCGTGTCGT GCTCATCGCC
GGCGGTCGAA CCAAGGGCAC GGGGTTCGAG CGGCTCCGCG ACGTCGCGGA GCGGATCGCT
GGCGTGGTCG CCATCGGCGA GAGTGCCCAC CGAGTGGTGG CCGACCTCGG CGACGCGGTG
CCGTGGATCG TGGAGGCGAA CTCGATGGAC GAGGCGGTGG CGGTGGCGAG CGAGCGAGCG
CTGCCGGGCA CGGTGGTGCT GCTCGCGCCG GCGGCGACCT CGTGGGATTG GTACCGGAGT
TTCGAGGAAC GAGGTGAGGA CTTCGTCCGC GCCGTTGCGG CGCTTGGGAG GTGA
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| Protein sequence | MSADALRAQV AGGRVLVLGA SVSGLAAERV LRSLGAEVIV ADDARALRDK ARSEGRELVD
PDAIVGARFD LVVVSPGIRT ERVERLGLDG PVIGELELGY LLAAAPITAV TGTNGKSTVT
TLTASMLGDG AVAAGNLGTP LSAVADSGAR RLVVEVSSFQ LVWAPTFRAS VATVLNLTPN
HLDYHGSFEA YRAAKARLIE RLAPGDVAVW PVGEGAVDAI AIPRGVEVRT FSATARDADY
RVEHGALVGP DGRTLVRVEE LGRRAPHDVA NMLAAWALAE ASGAELERAR RVAREFRGLA
HRLQVVAVRG GLTYVDDSKA TTPEAAVAAV RSFDRVVLIA GGRTKGTGFE RLRDVAERIA
GVVAIGESAH RVVADLGDAV PWIVEANSMD EAVAVASERA LPGTVVLLAP AATSWDWYRS
FEERGEDFVR AVAALGR
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