Gene Afer_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1228 
Symbol 
ID8323302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1284902 
End bp1285393 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID644952358 
Producthistidine triad (HIT) protein 
Protein accessionYP_003109832 
Protein GI256372008 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACC TCTGGGCGGG GTGGCGCTCC GCGTTCGTCA CGCAGGGTGC TCCGGCGGTC 
GACGGGTGCG TCCTGTGCGC GATCGGCGAC GGGGCCGATG GGGCCGATGA TCTCGTGGTC 
GCTCGTCGCG CGCGTGCCTT CTGCGTGCTG AACCTCTATC CGTACACGTC GGGGCACCTG 
ATGGTGGTCC CGCGGCGGCA CGGCAGCGAC CTCGGCGCGC TCTCGCACGA GGAGCTCGGC 
GAGATGTGGG AGCTCGTGCG CGAGGGAATG GCGGCGCTGG AGAGCGCCTA CCATCCCCAG 
GGCATCAACC TCGGCCTCAA TCTTGGTCGG GCATCGGGTG CGGGTATCGT CGAGCACCTG 
CACGTCCATG TCGTTCCTCG GTGGGTCGGG GACGCGAACT TCATGGTGAC CGCCGCGCAG 
ACACGGGTCC TCCCCGAGGC ACTCGGGGAC ACGCGCGATC GGTTGCGCCG CGCGTGGCCG 
GCGAGCTCGT AG
 
Protein sequence
MDYLWAGWRS AFVTQGAPAV DGCVLCAIGD GADGADDLVV ARRARAFCVL NLYPYTSGHL 
MVVPRRHGSD LGALSHEELG EMWELVREGM AALESAYHPQ GINLGLNLGR ASGAGIVEHL 
HVHVVPRWVG DANFMVTAAQ TRVLPEALGD TRDRLRRAWP ASS