| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1219 |
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| Symbol | |
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| ID | 8323293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1275354 |
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| End bp | 1276106 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952349 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003109823 |
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| Protein GI | 256371999 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGGCC ACTCCAAGTG GGCGACGATC AAGCACAAGA AGGGCGCCGT CGACAAGGCG
CGCGGCAAGC TGTTCGCCAA GCTAATTCGC CAGATCGAGG TGGCTGCCCG TGAAGGAGGA
GGCGACACCT CGGCGAACGC GACGCTGCGT ACCATGGTGC AGAAGGCGCG AGACGCCTCG
GTACCCCAGG CGACGATCGA GCGCGCCATC AAGCGCGGCA CTGGTGAGCT TGAAGGTGCT
CGCTACGAGC AGGTCAACTA TGAGGGTTAC GCCCCAGGTG GTGTGGCGAT CATCGTGTCG
TGCCTGACGG ACAACCGCAA CCGAACCGGT GCCGACGTCC GGGCAGCCTT CTCGCGCAAC
GGCGGCTCGC TCGCAGAGCC CGGTGCCGTG TCGTGGCAGT TCCAGCGTCT CGGACAGATT
CGTCTCTCGC GCGACGCTGA CGAGGACGAG TTGTTCCAAG CGGCACTCGC CGCGGGGGCA
GAAGACCTCA CCGACGACGG CGATGCGTGG CTCGTGACCG TCGCGGCGTC GGATCTCGGT
GCCGTCCGTG ATGCGCTCGA AGCCGCTGGG TTCGCGGTGG AGAGCGCCGA GGTGGAGTTG
GTCCCGCAGA CCACCGTCCC GGTCGAGGAC CCCCAGGAGG CCCGTCGGGT CCTCAGGCTC
GTCGAGGCGC TCGAGGACCT CGACGACGTC CAAGAAGTCA CGGCGAACTT CGACATGCCC
GAGTCGCTCC TCGAGGAGTT CGTGGCCGAG TGA
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| Protein sequence | MSGHSKWATI KHKKGAVDKA RGKLFAKLIR QIEVAAREGG GDTSANATLR TMVQKARDAS
VPQATIERAI KRGTGELEGA RYEQVNYEGY APGGVAIIVS CLTDNRNRTG ADVRAAFSRN
GGSLAEPGAV SWQFQRLGQI RLSRDADEDE LFQAALAAGA EDLTDDGDAW LVTVAASDLG
AVRDALEAAG FAVESAEVEL VPQTTVPVED PQEARRVLRL VEALEDLDDV QEVTANFDMP
ESLLEEFVAE
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