Gene Afer_1186 details

Gene Information

• Locus tag: Afer_1186
• ID: 8323260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 1238769
• End bp: 1239431
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644952317
• Product: putative transmembrane anti-sigma factor
• Protein accession: YP_003109791
• Protein GI: 256371967

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.254511
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCATCCC ATGACGATGG GTGCACGCTC CGCGAGGCGT ACCTGCTCCA CGAGCTCACG 
CCTGACGAGG TCACTCGCTT CGAGGGGCAC CTCGCTTCCT GCAGGTCGTG CCAGGACCGC 
CTGAGCGACA CCGCGCAGTT GCTCAGAGCG CTCGCAGACC TCGAACCACC CGACGAACCG 
GTGACCGGGT CCCAGGTGGC GCCCATGGCG CACGACCCTC GCCCAGCTCG CGTCGCCGGC 
CACAGTCATC GGCGCCGTCG GGGGGCGCTC ATCGGATTGG CCGGCCTGGT CGTCGGCGCG 
TCGCTCACCT TCGCGCTCGA GCATCCCGCC GAGCAGACCC CGTCCGCGGC CGAGGTGATC 
ACCCTTGCCG CTCCCCCGAT CCACGGCACG CTCGTCGTCG ACCGCCGTGC ATGGGGATCA 
TCGATCACCC TGACAGCAAC CGGCCTACCG TCGACGGGCC AGGTCTCACT CGTCGTCCGC 
TCGACCGGTG GACAGGTGGT GGACGCAGCG TGGCGTGCGA TCGGACCCCA GAGGATCAAC 
GTCCAGGCGC CGACCCCATT CCAACCGAGC GCCATCGCAG CCACGACGCT CGTGGCCCAC 
GGCCGCCACA CGACCGTGCT CTGGAGCTGG CACCGACTCG GCACAGAACC GGGGACCACC 
TAG 

 

Protein sequence

MPSHDDGCTL REAYLLHELT PDEVTRFEGH LASCRSCQDR LSDTAQLLRA LADLEPPDEP 
VTGSQVAPMA HDPRPARVAG HSHRRRRGAL IGLAGLVVGA SLTFALEHPA EQTPSAAEVI 
TLAAPPIHGT LVVDRRAWGS SITLTATGLP STGQVSLVVR STGGQVVDAA WRAIGPQRIN 
VQAPTPFQPS AIAATTLVAH GRHTTVLWSW HRLGTEPGTT