| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1185 |
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| Symbol | |
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| ID | 8323259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1238279 |
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| End bp | 1238782 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952316 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003109790 |
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| Protein GI | 256371966 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.47302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACG TCGTCGCTGA ACCGGTGATC GCGCGCCTCG TACGACTCAC GCCGGCCGTG
CGTGCGCGCC TCCGCGCGAT GCTCCCGGCG AGTGCGGTCG ACGACGTCAT CCAAGACACG
CTCGCGGCGG CCGTCGCACA CCACGACGAG CTCGAGGGCA CGGACGGACG CCTGCTGGGT
TGGTTGCTCG TCGTTGCTCG TCATCGCGCC ATCGACTGGC TCCGTCGCCA CCGCGGGCCA
CTCGATATTC GAACCCTCCT CGTCGACGAC GCCGACACAC CGGATCCGGC GAGCGCCGTC
GTCGACCGCG TCGTCCTCGA GGCCGCGCTG TCGCTCCTCC CTCAGCACCA GCGCGACGTC
GTCGTCGCGG TCTGCGTCCA TGGCGCCCCG ATCACACGAG TCGCCGACGA CCTCGGCGTC
CCCGCGGGGA CCATCCGGTC GCGTCTGCAC TATGGACTTG CGGCACTTCG ATCGCACCTG
GAGGCCAACC GTGCCATCCC ATGA
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| Protein sequence | MEDVVAEPVI ARLVRLTPAV RARLRAMLPA SAVDDVIQDT LAAAVAHHDE LEGTDGRLLG
WLLVVARHRA IDWLRRHRGP LDIRTLLVDD ADTPDPASAV VDRVVLEAAL SLLPQHQRDV
VVAVCVHGAP ITRVADDLGV PAGTIRSRLH YGLAALRSHL EANRAIP
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