| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1168 |
|---|
| Symbol | |
|---|
| ID | 8323241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1218809 |
|---|
| End bp | 1219612 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952298 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003109773 |
|---|
| Protein GI | 256371949 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGA GTACGTACCT CCATGGCCAC CACGAGAGCG TGCTGGCCGC CCATCGACGG
CGAACCGCCG AGAACTCGTG CGCGTACCTC CTCGACCATC TCCACCGCGG TGCCACGGTC
CTCGACGTGG GATGCGGCCC GGGCACCATC ACCGTCGACC TCGCACGGAT CGTGGCACCA
GGCACGGTCG TCGCGCTCGA CGCCGAGATC GGCATGCTCC AAGCAACGGC GGCGCTCGCC
GCAGAGCGTC AGCTGGACAA CGTGACCGTG GTCCTCGCTG ACGCGATGGC CTTGCCCTGG
CCCGACGCCA CCTTCGACAT CGTCCATCTC CACCAAGTGC TCCAGCACGT CCCCGATCCA
CGCGCGCTCC TGCGAGAGTG TCGACGCGTG TGCCGACCAG GAGGCATCGT CGCGGCCCGA
GACGCCGACT ACGCGGGCTT CCTCTGGAGT CCGCTCGATC CGGACCTCGA CCGGTGGCAG
ACGCTCTACG AGCAGGTAGC CCGTGCCTTG GGGGGCGAGC CGGACGCCGG GCGTTACCTG
CTCGAATGGG CCAGCGACGC GGGCTTTCGC GAGGTCATCG CATCGGCAAG CACATGGGTG
TTCGCAACCT CCGCCGAACG GGCCTGGTGG GGAGAGTCCT GGGCGAGACG GGCCCTGCAG
TCGGGTTTTG CGACGACGGC TCTCGCCACG CAACTCGCCC ATCGCGACGA GCTCGACGCC
ATCAGCCGGG CCTGGTTGCG CTGGGCACAC GCGCCCACTG GGTGGCTCCT CGTGCCTCAC
GGCGAAATCC TCGCGCGGCG GTGA
|
|---|
| Protein sequence | MASSTYLHGH HESVLAAHRR RTAENSCAYL LDHLHRGATV LDVGCGPGTI TVDLARIVAP
GTVVALDAEI GMLQATAALA AERQLDNVTV VLADAMALPW PDATFDIVHL HQVLQHVPDP
RALLRECRRV CRPGGIVAAR DADYAGFLWS PLDPDLDRWQ TLYEQVARAL GGEPDAGRYL
LEWASDAGFR EVIASASTWV FATSAERAWW GESWARRALQ SGFATTALAT QLAHRDELDA
ISRAWLRWAH APTGWLLVPH GEILARR
|
|---|
| |