Gene Afer_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1161 
Symbol 
ID8323232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1211108 
End bp1212397 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content71% 
IMG OID644952290 
Productgeranylgeranyl reductase 
Protein accessionYP_003109767 
Protein GI256371943 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTC TCCCGTCGTG CGTCGTCGTC GGTGCCGGTC CTGCGGGGTC GATCGCCGCG 
CGACAGCTCG CGCTCGCCGG CTGGCGTGTG ACGCTCGTGG ATCGCAGCAC CTTCCCTCGT
GACAAGGCAT GTGGTGACGT GGTCGGTCCT CAGGCGCTCG CGACCTTGGC CGCCGTAGGG
CTCACGCCAG AGCCCGAGTG GCCCCGGATC GGCGACCTGG ACGTCTGGGT CGAGGGTGCG
CGCCTGCACT TGCCGGCATC CCCAGGTCTC GCGCACCCCG GCGAGGGTCG GATGGTGACG
AGGCGGCTCT TCGATGCATG GCTGCGGGAC GCGGCCGTCG CGGCAGGGGC CCGTGCCATC
GTCGGCCGGG TTCGTGGTCT CGTCCAAGGA GCTGACGGTG TGCGGGTCCA CCTCGACGAC
GGCGTGCTCG ACGCCGACGC CGTCGTCGGT GCCGACGGGG CGCTGTCGAC AGTCGCGCGG
TCGGTGGGGG CGGCGTCACC GACACGGGCG CTGTGGGGCT TTGCACTGCG TCGCTACGTT
GCGTCGTCGA CGCTCGATGC CGACCGAGTC GACCTGCTTG CGCAGGCGAG TGGGTTCGCG
AGCTACGGAT GGGCCTTTCG AGGTGCCGAT GGCATCGCGA ACGTAGGCGT GGGCATCGCG
GTTGGGGGAG AGCGAGCACG CCTGCGAGGG CTGCGCCCCT TGCTCGATGA CTACCTCGGT
CGGATCGGAC TCGTCGATGT GGCCGACGCT CCTGTGCTCG GTGGCTGGTT GCGGATGGGT
GGGATCGGGG TGGCGCCGTG GCGCGGTCGT GTGCTCTTGG TGGGTGACGC CGCGGGTTTC
GTGAACCCAC TCCAAGGCGA AGGGATCTGG GCGGCGCTCG CTTCTGGGGC CCAGGCAGCC
GCGGCTCTCG GTGCAAGGGG ACCGCTGGGA GGAGGACCGG CCTACGGTCG TTGGGCCGAG
GCCCAGATGG CGCCGTTCCT CGCTGGCGCA GCACTCCTCC ATCGAGCTGC CCTCTGGAAT
CCTCGGCTCG CAGATCGGGC GGTCGCGGCT GGTGCCAGGG TGCTCGCGCA CCGGCCTTCA
CTGGCAGCTG GGGTCGGAGC CTGGTTGAAC GGGCTGGTCG CGCTCGATGG TCCGGGTCAT
GGGTCTGGGT GGATGCTCGA TCGAGCGACG GTGATGGCTG CGCGGGCGAG CGGCTTGCTC
GGGGGCTACG AGCTCGGTGC CTCACTCGGC CAGGTGCCGT CGATGCTCGC GAGGCCGTCG
AGGCTCCAGC GATTGTGGCG GGCGACGTAG
 
Protein sequence
MSPLPSCVVV GAGPAGSIAA RQLALAGWRV TLVDRSTFPR DKACGDVVGP QALATLAAVG 
LTPEPEWPRI GDLDVWVEGA RLHLPASPGL AHPGEGRMVT RRLFDAWLRD AAVAAGARAI
VGRVRGLVQG ADGVRVHLDD GVLDADAVVG ADGALSTVAR SVGAASPTRA LWGFALRRYV
ASSTLDADRV DLLAQASGFA SYGWAFRGAD GIANVGVGIA VGGERARLRG LRPLLDDYLG
RIGLVDVADA PVLGGWLRMG GIGVAPWRGR VLLVGDAAGF VNPLQGEGIW AALASGAQAA
AALGARGPLG GGPAYGRWAE AQMAPFLAGA ALLHRAALWN PRLADRAVAA GARVLAHRPS
LAAGVGAWLN GLVALDGPGH GSGWMLDRAT VMAARASGLL GGYELGASLG QVPSMLARPS
RLQRLWRAT