Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1145 |
Symbol | |
ID | 8323215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1192447 |
End bp | 1194078 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644952273 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003109751 |
Protein GI | 256371927 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAAC CAGACCCTAC GCCAGCCATG CCCCGAGCCC AGCGACGTCG AGTATCGAAG CGACTTCGGC GCCGACGCCG CCTCGTCATC TCCCTCGCCA CCGTTCTCGC GCTCATCGTG CTGATCGGCG CGGGCAGTTA CCTCTACATC CGCTATCGCT TCGGCCAGAT CGGACACGTG TCGGTCGGCG GGCTCACGGC GCAGAGCTCC GGTCCCGAGA ACATCCTGCT CGTCGGGAAC AATTCACGGT GCACGTTGAC GAAGTACTCA TCGTTCTACT CGAAGGGCTC ACAGCACTTC GGCACCTGCA GCGAGGTTGG TGGTGGTCGC AGTGACGTGA CGATGGTCCT ACACGTCGAT CCAGCGACGC ACCGCGCCTA CCTGCTGTCC ATCCCGCGAG ATCTCTGGCT GCCCATGCCG AACGGCAACG GACTCGAACT CCGTGTCGAC GATGCGCTCA ACTCCGCCGA GCGCCCCTAT CTCCACCTGC CCTTCGGACC GACCTTGCTC GTCAAGACGA TCGAGCAAGA CCTCGGCATT CCCATCAACC ACTACGTGGA GTTGAACTTC TACACCTTCG AGCAAGTCGT CAACACGCTC GGCGGCGTCA CACTCGACTT CCCGACCAAG CTCGTCGACC ACTACTCCGG CCTCAACATC ACGACGACGG GCTGCCAGCA CCTCACCGGC ACGCAAGCCC TCGCGCTCGT TCGAGCACGA CACCTGTACT ACTACAACCC CTCCACCGGG ACCTGGGACT ACGACGGCAC GGGTGACCTC GGACGCATCG TGCGAACCCA CATCTTCCTT CGAGCCCTGG CCAGTCAGGT GAAGAGCTCG GCACTCTCGA ACCCGATCAC GGCCAACGCG CTCCTCGGCT CCCTGCTGCC GGCGCTCAAG GTCGACCCGT CGTTCTCCCT CTCGGACATG GTGAGCCTCG CGCTTGCCTT CCGACACGTC AACCCTGGCT CGATCCCGAG CGCGACGTTG CCCGTGATCA TCCCCTCCCA GAGCACGTTC ACCGACCCTG CGAACCCGTC CAACTATCAG GCGCCGGGCT CCATCGTCAT GCCGTGGGCC CAGAGCGACC TATCGGTCAT TCGCCAGTTC CTCGGCTCTG AGGCCCCCAA CCTCAACGCC ATTCGTCCAG CCTCCGTCAC GGTCGCGGTA CGCGACGCAA GTGGTGTTGG CAACGGTAGC CAGCTCGTCG CTGGACTCTC CCAGCTTGGG TTTCCAACGA CCAACCTCGG TACCGCAACC TACGCCGGCA CCGACTCCGA GACCGTCGTC GCCTACAAGC CCGGCATGCT CGCCCAAGGC GAGCGCGTGC TCGCCAGCCT GTCTGGCCAG GCAGTCCTTG CCGAGGGCTC GGCAAATCAG CCCGCCGACG TGGTCATCAC CGCTGGATCG ACGATCGCCA CCACCGCAAC CTCGGCCCAG ACCGCAGCCC TGACGACAAC CTCGGCACCG ACCGCCACGC TCACCGCCAC CTCGACGACC ACACCACCGG TGGGAACGCT CGTGACCTCG ACGCAGAGCC TCCAGCAACT CGCCTCGTCG AACCTGTGGC AGGCCAACGC GAGTGGGTCC GAGTTCTGGT GGGATCCACG TCTGTGCCCC GCCCACGCCT AG
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Protein sequence | MTQPDPTPAM PRAQRRRVSK RLRRRRRLVI SLATVLALIV LIGAGSYLYI RYRFGQIGHV SVGGLTAQSS GPENILLVGN NSRCTLTKYS SFYSKGSQHF GTCSEVGGGR SDVTMVLHVD PATHRAYLLS IPRDLWLPMP NGNGLELRVD DALNSAERPY LHLPFGPTLL VKTIEQDLGI PINHYVELNF YTFEQVVNTL GGVTLDFPTK LVDHYSGLNI TTTGCQHLTG TQALALVRAR HLYYYNPSTG TWDYDGTGDL GRIVRTHIFL RALASQVKSS ALSNPITANA LLGSLLPALK VDPSFSLSDM VSLALAFRHV NPGSIPSATL PVIIPSQSTF TDPANPSNYQ APGSIVMPWA QSDLSVIRQF LGSEAPNLNA IRPASVTVAV RDASGVGNGS QLVAGLSQLG FPTTNLGTAT YAGTDSETVV AYKPGMLAQG ERVLASLSGQ AVLAEGSANQ PADVVITAGS TIATTATSAQ TAALTTTSAP TATLTATSTT TPPVGTLVTS TQSLQQLASS NLWQANASGS EFWWDPRLCP AHA
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