| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1123 |
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| Symbol | |
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| ID | 8323193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1168572 |
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| End bp | 1171136 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952251 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_003109729 |
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| Protein GI | 256371905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGCTG TCATCATCGC CGGAGGCGAG GGAACCCGCC TTCGGCCCCT CACCTCGACC
ACTCCGAAGC CGCTGCTCCC GGTCGCGAAC CGGCCCATGA TCGCCCGCGT CGTCGACCTC
CTCGTCGCCA ATGGCATTGA CGACATCATC GTCACCGTGG CCTACCTGGG CTCGGCCATT
CGCACCTATC TCGGCGACGG CACCGACTGG GGAGCGCGTA TCCGCTACCT CCAGGAGGAG
TCGCCGCTCG GGACCGCAGG CGCGGTCCGC AACGCCAGAC ACCTCCTCGA GGACACCTTC
ATCGTGCTCT CTGGCGACGT CGTGACGACC GTGGATCTCG AGGCCGCGCG ACGCTTCCAC
CACGAACGGG GCGCCAGTGC GACCATGGTC CTCACCACCG TCCCCGATCC CACCGAGTTC
GGCGTCGTCG CGACCGAAGA CAGCGGAGCG GTCACCAGGC TCATCGAGAA GCCGTCGTGG
GGCGAGGTCT TCACGGACAC GGTGAACACC GGCGTCTACA TCCTCGAACC GTCCGTCCTC
GATCGCATCC CCGCCAACCG TGCGGTGGAC TTCTCCGAGG AGGTGTTCCC GCAGATCCTC
GACGACCGCG GAGCGCTGTT TGGCTACGTG GCCGACGGCT ATTGGGCCGA CGTCGGCACC
TTCTCGGGAT TTCACCAGAC CCACCACGAC GTGCTCGACG GGCGTGCCGG CATCGCTCCC
TCGGGCTTCG AACTGGCTCC CGGCGTCTAC GTCGGTGACC GCTCGACGAT CGACCCCTCG
GCACTCTTGG AGGCGCCGTG CATCGTCGGC AACGACGTTC GCATCGGCCC CGGGTCGAGG
CTCGGCCCCT ACACCGTGGT TGGCCACGGC GTGCGGGTGG GGTCCGACGT CCATCTTGAC
GGCACCATCG TCTTCGACCA CGCATGGATC GCCGACGGGG CACGTCTCGG CCGCGCGATC
GTCGGCCGCG GCGTCGACAT CCGCCGCCGG GTCAACGTAC ACGATGGCGC AGTGCTCGCC
GACGGCGTCC TCGTCGGACG CGACGCGGTG GTGCGAGCCG ACATTCGGGT GTATCCGGGC
AAAACGGTCG ATCCGCTCGC CACGGTCGCC AACTCCATCG TCTGGGAGAG TGGCGCGAGT
CGGACGGTGT TCGGGCCGCT CGGCATCTCC GGCCTCGCCA ACGTCGACAT CAACCCAGAG
ATGGCGACAC GGATCGCGAT GGCGCTCGCA TCGCAGCTCC CCCCCAACGG CGCAGTCCTC
GCGGCACGCG ACACCTCACG GGCCGCACGC ATCATCAAGC GCGCGATGAT GGTCGGGTTC
AACGCCGTCG GGCTCGACGT CTGGGACCTC GAGGCAACGA CCACCCCGGT CCTCCGTCAC
GCCGTGGCCG CCACCGATGC GGTCGCCGGG GTACGAGTCG CCCTCGACGC CGACGATCCC
CAAGCCCTGA CCATCGAGCT CCTCGGGGCC GAAGGCGCCG ACCTCGTCGC GACCGAGCGA
CGCAAGGTGG AGCGCGCGCT CGAGCGCGAG GAGTTTCGCA GGGTCTCCGC GAGCGAGATC
GGCGATCTCG TCATGGTCTC CCACGCGACC GACCGATGGA AGGCAGCGGT GACCGCCCTG
CTCGACATCG AGCGGATTCG GGAGCGCGCC TTCAAGCTGG TCCTCGACTA CTCGTACGGC
GTCGTGGCGT CGAGCCTTCC GCAAGCGATC GCGTCGTTCC ACGCGGACGT TCTCGCCACC
CACGCCTACC CCTCGACCGC ACGCCTCATA CGACTTCGAC TGGAGGAGCA GATCGCCGAA
CTCGGCCGTC TGGTTCGAGG CGCCAAGGCC GACCTCGGTG CGATCGTGAA CGCCGGCGGC
GAACGGCTGC TGCTCACCGA TGCGCGCGGT CGCGTCGTCC CGATCGCCGG TATCGCCACC
ATCCTCGCCG AGCACCTGGT CGCGACCGGG AAGGTCCGGC GGCTCGTGGC GAGCGCGGCC
GTCGCGAGTT CGGTCGCCGA CACCGCTCGC GCCCTCGGCA TCGAGTTCGC ATGGTGCGGG
CTCTCGCGAG CTGATCTCGC CGCCGCCGTC GCCGATGCAC CAGGAACGCT CGCCATCGGC
CACAGCGGCC TCGTGTTCTA CTCCGGATGC GCGAGCTCGT CGGACGCAGC CGTCACCCTC
GGACTCATCT TGGAGGCCCT CGCCACCACC GGAACCGATC TCGCCCATGT CATCGACCGC
ACGCCCGCCG AGACGACGGT GGCCGAGGCG GTACCCGTCC CGTACGCGGT CCTCGGTGCG
ACGATGCGGG GGCTGCGCAC CTTCGCCGAG GAGCAGGGGC CGGTCGAGCT CGTCGCGACC
GATGGCCTTC GAGCGCAGTT CCAGGACCGA TTCTGGCTCC TCTCGCCCGA CCCCCAAGAA
CCGGTCGTGA CCGTCATCGT GGGTGCGGCC GACCCCGAGG TGGCCAAGGA CGATCTCGCG
GTCCTGCGCA CCGCTGTCGC GGCGCGTCGC GACGAAGCAA CGCAAGGTCG CAAGGGCTCG
AATTCCAACG GCAGCCTGCC CCCCTCGACC TCCGCGCGCG GGTAA
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| Protein sequence | MQAVIIAGGE GTRLRPLTST TPKPLLPVAN RPMIARVVDL LVANGIDDII VTVAYLGSAI
RTYLGDGTDW GARIRYLQEE SPLGTAGAVR NARHLLEDTF IVLSGDVVTT VDLEAARRFH
HERGASATMV LTTVPDPTEF GVVATEDSGA VTRLIEKPSW GEVFTDTVNT GVYILEPSVL
DRIPANRAVD FSEEVFPQIL DDRGALFGYV ADGYWADVGT FSGFHQTHHD VLDGRAGIAP
SGFELAPGVY VGDRSTIDPS ALLEAPCIVG NDVRIGPGSR LGPYTVVGHG VRVGSDVHLD
GTIVFDHAWI ADGARLGRAI VGRGVDIRRR VNVHDGAVLA DGVLVGRDAV VRADIRVYPG
KTVDPLATVA NSIVWESGAS RTVFGPLGIS GLANVDINPE MATRIAMALA SQLPPNGAVL
AARDTSRAAR IIKRAMMVGF NAVGLDVWDL EATTTPVLRH AVAATDAVAG VRVALDADDP
QALTIELLGA EGADLVATER RKVERALERE EFRRVSASEI GDLVMVSHAT DRWKAAVTAL
LDIERIRERA FKLVLDYSYG VVASSLPQAI ASFHADVLAT HAYPSTARLI RLRLEEQIAE
LGRLVRGAKA DLGAIVNAGG ERLLLTDARG RVVPIAGIAT ILAEHLVATG KVRRLVASAA
VASSVADTAR ALGIEFAWCG LSRADLAAAV ADAPGTLAIG HSGLVFYSGC ASSSDAAVTL
GLILEALATT GTDLAHVIDR TPAETTVAEA VPVPYAVLGA TMRGLRTFAE EQGPVELVAT
DGLRAQFQDR FWLLSPDPQE PVVTVIVGAA DPEVAKDDLA VLRTAVAARR DEATQGRKGS
NSNGSLPPST SARG
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