| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1044 |
|---|
| Symbol | |
|---|
| ID | 8323108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1080108 |
|---|
| End bp | 1081103 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952171 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003109655 |
|---|
| Protein GI | 256371831 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC ACGCTCTCTC GGCGACGAGC GCCGACTGGA GTGCTGGAGA CTCTCACGCT
CACCCTGCAC TCGAGCTTGA TGGTCTCACG AAGCGCTTCG GCGATCGCGT CGCCTTCGAG
AGCGTGACCC TTCGAGTCGA TCGCGGCGAG GTCTTCGGAC TCTTGGGGCC GAACGGCGCT
GGGAAGACCA CGCTGGTACG GACCTGTGCG ACCCTGGTGC GCCCCAGCGA GGGGCGCGCG
CGTGTGCTCG GTATCGACCT CGAGGCCTCC AACGGGCCCG AGATCCGACG CCGGATCGCG
GTGATGCCGG AGGCTCCAGG CCTCTACGGC AACCTCAGCG TCGTCGAGAA CCTGCGCCTG
TTCGCACGGC TCTACGGAGT CCACGACGTC GACCGCGCCA TTCGTGAGGC CCTCGACGCG
GTCGATCTCT CGAGTCGACG CGACGATGCC TGTCGCGCCC TGTCGAAGGG TCTCCGTCAG
CGCGTCGCCA TCGCTCGTAC GCTCCTCGGC CAGCCGGAAC TGATCTTCCT CGACGAACCC
ACGTCCGGTC TCGACCCGGT CGCAGCCCGC GATGTTCTCG AACTCATTGC CAGTCTGCGA
GCCCAGGGCC GCACCGTACT CATCACGACG CATCGGCTCG ATGAGGCGGA ACGGGTGTGC
GATCGCGTCG CGATCCTTCG TCAGCGTCTC CTCGCTGTCG GCAAGCCAGG GGAACTCGGA
CTCGGGAGTC AGCGGTCCCT CGTCGTCCGC GTCGGAGGTG CCGCAGAGGA CGCCAAGGCG
CATCTCGCAC CCGTCGTCGA GGCCGCCCAT GTCGTCGTCA CCGACGAACA CACGTTGCGC
ATCGACGGAG CTGAGCCGGA CGAGCTGGCA CCAGTCGTCG CGGAGGCGCT GGTCCACGCC
GGTGACCGCC TCCTCGAGCT CGCAAGCCCC CGAGAGCGCT TGGAAGAGGT CTACCTCGAG
CTTGTCGGGG GCGAAACCAA GGAGAGCGAT CGATGA
|
|---|
| Protein sequence | MPDHALSATS ADWSAGDSHA HPALELDGLT KRFGDRVAFE SVTLRVDRGE VFGLLGPNGA
GKTTLVRTCA TLVRPSEGRA RVLGIDLEAS NGPEIRRRIA VMPEAPGLYG NLSVVENLRL
FARLYGVHDV DRAIREALDA VDLSSRRDDA CRALSKGLRQ RVAIARTLLG QPELIFLDEP
TSGLDPVAAR DVLELIASLR AQGRTVLITT HRLDEAERVC DRVAILRQRL LAVGKPGELG
LGSQRSLVVR VGGAAEDAKA HLAPVVEAAH VVVTDEHTLR IDGAEPDELA PVVAEALVHA
GDRLLELASP RERLEEVYLE LVGGETKESD R
|
|---|
| |