Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1029 |
Symbol | |
ID | 8323093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1061852 |
End bp | 1062997 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644952156 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003109640 |
Protein GI | 256371816 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.042764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTCA CCGAGGAGCA CGACGTCTTT CGACGCAGCG TACGTGGGGT GCTCGAGCGC GAGGTGCTCC CGCACCTGGA GGAGTGGGAA CGGGCTCACA GCTTCCCGGG CCATACGGTC TTCAAGGCCC TCGGCGCCGC CGGTCTGCTC GGCCTCGAGT ACGACCCGGC CTACGGCGGC CAGGGCGCGG ACCACTCCTA CACGGTCATT TTCGGCGAGG AGCTCGGTCG CATGGGCTTC GGGGCGCTCG CCATGGCCAT CTCGGTGGTG ACCGACATGG CGACCCCGTC GCTGGCCCGT TACGGCTCGC ACGAACTCAA GCTGCACTAT CTCGTGCCGA CCCTGCGGGG GGACTCCATC GCATCGGTCG CGGTGTCGGA GCCGGACGCG GGTTCTGACG TCGCGGCGCT CCGGACTCGC GCCGTGCGCG ACGGCGACGA CTGGGTCATC ACCGGCACCA AGCTCTACAT CACGAATGGC ACCCAGGCAG ACTGGATCTG CCTGCTTGCG CGCACGAGCG ATGAGGGCGG CTATCGGGGG ATGTCCCAGA TCGTCGTCCC GACCGACGCG CCGGGGTTTC GGGTCGCGCG CGCCCTCGAC AAGCTCGGCA ACCACGCCTC CGACACCGCC GAGCTGGTGC TCGAGGAGTG TCGCGTGCCC GTGTCGAACA CCATCGGGAC CATCGGGCGG GGCTTCCAGC AGCAGATGGC ACAGTTCCAG AACGAGCGCA TGATCGCGTC CTACTCGGCG GTCGGCGCGA TGGAACGTGC GCTCGAGCGA ACCGCGGCCT ATGCACGCGA GCGGATGGTC TTCGGGGAGC CACTCCTTGC CAAGCAGTAC GTGCAGTTTC GCTTGGCGGA GCTCAGCGCC GAGGTCGATC TGCTTCGTCA CTACAACTAC GCGTGCGCCG AGGCCTATAT GGCAGGCGAG GACACCACGC GCTTTGCCAC CATTGCCAAG CTCACCGCGG GCCGCCTGAG CCGCGCCGTC GCTGACTGGT GTCTGCAGCT CCACGGTGGG GCTGGCTACA TGGAGGAGAC GTGGGTGTCG CGCTACTTCC GCGATGCGCG GCTCCTCTCG ATCGGAGGCG GTGCCGACGA GGTGATGCTC CAGATCCTGA CGCGCCTCGA GGGCTACGAG CCATGA
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Protein sequence | MRFTEEHDVF RRSVRGVLER EVLPHLEEWE RAHSFPGHTV FKALGAAGLL GLEYDPAYGG QGADHSYTVI FGEELGRMGF GALAMAISVV TDMATPSLAR YGSHELKLHY LVPTLRGDSI ASVAVSEPDA GSDVAALRTR AVRDGDDWVI TGTKLYITNG TQADWICLLA RTSDEGGYRG MSQIVVPTDA PGFRVARALD KLGNHASDTA ELVLEECRVP VSNTIGTIGR GFQQQMAQFQ NERMIASYSA VGAMERALER TAAYARERMV FGEPLLAKQY VQFRLAELSA EVDLLRHYNY ACAEAYMAGE DTTRFATIAK LTAGRLSRAV ADWCLQLHGG AGYMEETWVS RYFRDARLLS IGGGADEVML QILTRLEGYE P
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