| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1021 |
|---|
| Symbol | |
|---|
| ID | 8323085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1047246 |
|---|
| End bp | 1048784 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952148 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003109632 |
|---|
| Protein GI | 256371808 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.539735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCACGG AGCAACGGAC GACATCCAAA GAGACCTGGA TCAAGGTCCT GGATCAAACC
AAGTGCATCG GCTGCCATGC GTGCACGACC GCGTGCAAGT CGGAGAACCA GGTCCCGCTG
GGGGTGACGC GGACCTACGT CAAGGCCGTC GAGGTCGGTA CGTTCCCGCA GGTTCGGCGC
TCGTTCCAGG TCACACGCTG CAACCAGTGC ACCAACCCAC CGTGCGTCGC GGCCTGCCCG
ACTGGGGCGA TGTATCAGCG ACCCGATGGC ATCGTCGATT TCAACAAGGC CATCTGCATC
GGCTGCAAGG CGTGCATGGC CGCATGCCCC TACGACGCCA TCTTCATCAA TCCCGAGGAC
CACTCCGCCG AGAAGTGCAA CTTCTGTGCG CATCGTCTCG ACATCGGCCT CGAACCGGCG
TGCGTCGTCG TCTGCCCGAC CGAGGCCATC CTCATCGGCA AGCTCGAGGA CGACACCGCA
CGCGCGACCC GCGTCGTCCA CCGCACCCCG GTGGCCGTGC GCAACCCGGA GAAGGGGACC
CGTCCGAAGC TGTTCTATCG CGGCGCACAC CAGGCAACCC TGGATCCCAT CGCGGCCGAG
CGTCCGCGCG GCGATACGTA CATGTGGTCC CAGATCCCGA GCGGACCGCA CGTCATCGCC
TCGGGCCACC CGGCCGACGC CCACGTGCCG AACTCGTCGG CCAAGGCCAA GCTGGTCTAC
GACGTCGCCC ACAATGCACC GTGGGGCGGC CTGGTCAGCC TCTACACCTG GACGAAGGGC
CTCTCGGCCG GTGCCTACCT CGTGCCGATC ACGCTGTGGT TGCTCGGGAA GCTGCCGTTC
TCGTCGGACC TCGTCCGCAT CTGGGGACCG TCGATCTCGC TCGCCTTCCT CGCGATCACC
GGGGGGCTCC TGATCGGCGA CCTCAAGCAT CCCGAACGCT TCTACCTGCT CTTCCTCAAG
GGTCGACCCG AGAGCTGGCT CGTCAGGGGG GGCTACGGAC TCCTCCTCTT CGGCGGCATC
GACACGCTGA CCCTCATCGC CGGCATCCTG CACAGCTCGA CCGCCATGGG CATCCTCGCC
ATCCCGGGGA TTCCCCTTGC CGCACTCGCG GCGCTCTATA CCGCGTTCCT GTTCGCCCAA
GCCAAAGCAC GCGATCTCTG GCAGAGCCCC CTGATGCCGA TCCACCTCGT CATCCAGGCG
CTCCTGCTCG GATCGGCCGT CAGCGTCTTC GTCGCGGCCA TCACCGATCC CGGCTCGACG
GTCGGCTACC TCGAGCGTCT CACAGGCGCG CTCGCGATCC TGAACGCGCT GCTCGTGGTG
GGTGAGATCA CCATCACGCA CCCCACGGCC AAGGCCCACC TTGCCGTGTG GGAGATGACC
CACGGCGCAC TCGGGCGCCT CTTCTGGCTG GGATTCGCGC TCGATCTCGT CGGGATCCTC
ACCCCGCTCG GCATGGCCCT TGCCGCAGCA GCGCTCCTGT GCATCCTCCC GCTCGAACAC
GCCTACGTCC AAGCCGGCCA ACGCGTCCCG TTGGCGTAA
|
|---|
| Protein sequence | MLTEQRTTSK ETWIKVLDQT KCIGCHACTT ACKSENQVPL GVTRTYVKAV EVGTFPQVRR
SFQVTRCNQC TNPPCVAACP TGAMYQRPDG IVDFNKAICI GCKACMAACP YDAIFINPED
HSAEKCNFCA HRLDIGLEPA CVVVCPTEAI LIGKLEDDTA RATRVVHRTP VAVRNPEKGT
RPKLFYRGAH QATLDPIAAE RPRGDTYMWS QIPSGPHVIA SGHPADAHVP NSSAKAKLVY
DVAHNAPWGG LVSLYTWTKG LSAGAYLVPI TLWLLGKLPF SSDLVRIWGP SISLAFLAIT
GGLLIGDLKH PERFYLLFLK GRPESWLVRG GYGLLLFGGI DTLTLIAGIL HSSTAMGILA
IPGIPLAALA ALYTAFLFAQ AKARDLWQSP LMPIHLVIQA LLLGSAVSVF VAAITDPGST
VGYLERLTGA LAILNALLVV GEITITHPTA KAHLAVWEMT HGALGRLFWL GFALDLVGIL
TPLGMALAAA ALLCILPLEH AYVQAGQRVP LA
|
|---|
| |