Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0985 |
Symbol | |
ID | 8323049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1005265 |
End bp | 1006026 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952113 |
Product | CRISPR-associated protein Cas5 family |
Protein accession | YP_003109597 |
Protein GI | 256371773 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGC TCGCACTGCG CCTTGGAGGA CCATTGCAGG CCTGGGGCAG CAGCCAGCGT CTCGACCACT ACCGACGAAC GGAGCGTTTC CCAACTAAGT CAGGGGTCAT CGGGCTGCTC GCAGCCGCCC TGGGGCGTCC TCGGTCCGCA GCTCTCGACG ATCTCGGCGC GCTGCGCTTC GCCGTGCGCA TCGATCGACC AGGTGAAGTC TTGCGAGACT TCCACACACT GTCGAGTCTG TTCGACGACA AGAAGCGGTT CGCGCCCGGC GAGGGGAGAC TGCCGACTGC ATCGGGCGGC TATCGCTCTG CCGCTACGAG CACGCAAGTC ACCGAACGGT TCTACCTCGC CGACGCCTGC TTCGTCGCTG GGCTCGAAGG CGACGCCGCG CAGCTCCAAG AGCTCGACGA CGCACTCAGG ACTCCGGTGT TTCCCCTGTA CCTCGGGCGA CGCTCCTGCC CCCCGGACAA GCCGCTGCGG CTCGGCGTCT ACGACGGCGG GCTCATCGAC GTGCTGGCAA GCATCCCGTG GCAGGCCAAC GACCCCGCGC AGTCCGCGAC GTCGATACGG TGTGAACTCG TCGTCGAGAA TCCCGCCGGC GATGTCGAGC TTGCGGACCA GGCACGAAGC TTCGACCCAC TCACGCGCTC CTACACGCGC CGCCGGGTCA GTCATCACTA CGTCGAGGTG ACCATCGGCC ACGGCCACGA ATCGGCTCGC TCGACCCATG ACCCGATGGC CCTGCTCGAG GAGGGCGATT GA
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Protein sequence | MSVLALRLGG PLQAWGSSQR LDHYRRTERF PTKSGVIGLL AAALGRPRSA ALDDLGALRF AVRIDRPGEV LRDFHTLSSL FDDKKRFAPG EGRLPTASGG YRSAATSTQV TERFYLADAC FVAGLEGDAA QLQELDDALR TPVFPLYLGR RSCPPDKPLR LGVYDGGLID VLASIPWQAN DPAQSATSIR CELVVENPAG DVELADQARS FDPLTRSYTR RRVSHHYVEV TIGHGHESAR STHDPMALLE EGD
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