| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0890 |
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| Symbol | |
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| ID | 8322954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 911440 |
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| End bp | 913512 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952024 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003109508 |
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| Protein GI | 256371684 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGAGC TCGTGCAAGA GGATGTGATC GTGCGGGTCG AGGGGCTCAC GACCGATCTC
GTGCGTCACG GTGGCTCGGT TCGGGTGATC GATGGCGTGA GCTATGAGGT CGCCAGGGGT
GAGACGCTCG GGATCGTGGG GGAGTCGGGT TCGGGCAAGA CCATCTCGGC ACTCAGCCTG
CTCGGACTCT TGCCTCCCCA GATGCGCGTC GTCGCTGGCT CGGCACGGCT CGAGGGCGAG
GAACTCATCG GTGCGAGCCC GCGGCGCCTG CGCGAGCTCC GCGGTGCGGC CATCGGCATG
ATCTTCCAGG ACCCGCTGAG CTCGCTGAAC CCGTCGAAGA CCATCGGGTG GCAGGTGGCC
GAACCGTTGC GCATCCACCA GCGTCTCGGA GCCGCCGCAG CGCGCCAGCG CGCGCTCGAG
CTGCTCGAGC TCGTGGGCAT CCCGAGCCCG AAGGAGCGCT TGAACGACTA CCCGCACCAA
CTCTCCGGCG GGATGCGCCA GCGGATCATG ATCGCCATCG CGCTCGCGTG TGGACCGAAG
CTCATCGTCG CCGACGAGCC CACGACCGCC TTGGACGTGA CCATTCAGGC CCAGATCCTC
GGCCTCCTCG GCGAACTGCA GGACCGGCTG GGTACAGCCA TGTTGCTCGT CACCCACGAT
CTCGGGGTCA TCGCGGGTCG TACCGACCGG GTGCTCGTGA TGTACGCCGG TCGGGTCGTC
GAGGCTGCGC CGACGCGCAC CCTGTTCTCG GCCATGCGCC ATCCCTACAC CCAGGCCCTC
CTCGCGTCGA TCCCCGTGAT CGGGATCGAT CGGAGCGTCC CGCTGCCGGC GATCCCGGGC
ACACCGCCGC CGCTCGGCGG AGCGGGGGTG GGCTGTGCGT TCGCGCCCAG GTGTCCGCGT
GCCGACGAGC GCTGCCGCCA AGAGATGCCA CCACTCGCGG TGAGCGCTGG CCACGCAGTG
GCCTGCTGGC ACCCCGTCGA CGGACCCGTT CGACGGACCA GGCTCGAGGT CGCTACCTCG
CTTGCGGCGG TGCCACGTGC TATGGAGCCG TTGGTCGAGC TGGTCGGGCT TCGCAAGGAG
TTCGAGATCC ACTCCAACGT GACGCGGCGC CATCTGGGGA CGGTGCACGC GGTGGCGGGG
GTCGATCTCG TCATCGGACG TGGTGAAACC GTTGGCCTCG TCGGTGAATC GGGCTGCGGC
AAGACGACCC TCGGACGTAT GGTCGTCGGG CTCGAGCGCC CGACGGGTGG TGAGCTGCGC
ATCGGTGGCG TCGACGTGGT TCGCCTCCGC GGCAGCGAGC GGCGATCGTT TCATCGGCGG
ATCCAGCTGA TGTTCCAAGA TCCGTTCGCA TCGCTCGATC CGCGGATGCG CATCGCGAGC
GCGCTCGCCG AACCTTTGCG CGTTCAGGGG CTCGATCGTG GCGAGGAGCG GCTGGCGGGA
CTGCTCGAGC GCGTCGGCTT GGCGCGCGAG GCGCTGTGGC GCTACCCCCA TGAGTTCTCC
GGCGGCCAGC GCCAGCGCAT CGGTCTCGCG CGGGCGCTGA CGCTCGACCC CGAGCTGATC
GTGGCCGATG AGCCGGTGTC GGCGCTCGAC GTCTCCATTC GCTCCCAGAT CCTCAATCTC
ATGCGCGAGA CCCAGCGCGA GCGCGGTCTC AGCTATCTCG TGATCAGCCA TGATCTGTCG
GTGGTGAGCT ACCTCGCCGA TCGCATCGGC GTGATGTACC TGGGCCGTCT CGTCGAGGTC
GGGCCGACGG CCGCGGTGAT CGCCTCGCCA GCGCATCCCT ACACGCGCGG ACTGCTCCGT
TCGGTGCCGC TTCCGGATCC AGAACGTGAG TCGGCAAAGC GTCGTCTCGG AGCGGTGATC
GAAGGCGAGC TCCCGTCGGC GTTGCGCCCA CCGACGGGCT GTGCGTTTCA CCAGCGCTGC
CCATTTCGGG TGGCCCGTTG CGAGGTCGAG GCGCCCGAGG CTCGCACGCT CGACGATGGC
AGGGTGGTCG CCTGTCATCG CGTCGACGAC GTCCTCGCCG AGCCGTGGTC GCTCGAGGAC
GTCGGACAGA TGGCGAGCGC GCTGCGAGCG TAG
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| Protein sequence | MQELVQEDVI VRVEGLTTDL VRHGGSVRVI DGVSYEVARG ETLGIVGESG SGKTISALSL
LGLLPPQMRV VAGSARLEGE ELIGASPRRL RELRGAAIGM IFQDPLSSLN PSKTIGWQVA
EPLRIHQRLG AAAARQRALE LLELVGIPSP KERLNDYPHQ LSGGMRQRIM IAIALACGPK
LIVADEPTTA LDVTIQAQIL GLLGELQDRL GTAMLLVTHD LGVIAGRTDR VLVMYAGRVV
EAAPTRTLFS AMRHPYTQAL LASIPVIGID RSVPLPAIPG TPPPLGGAGV GCAFAPRCPR
ADERCRQEMP PLAVSAGHAV ACWHPVDGPV RRTRLEVATS LAAVPRAMEP LVELVGLRKE
FEIHSNVTRR HLGTVHAVAG VDLVIGRGET VGLVGESGCG KTTLGRMVVG LERPTGGELR
IGGVDVVRLR GSERRSFHRR IQLMFQDPFA SLDPRMRIAS ALAEPLRVQG LDRGEERLAG
LLERVGLARE ALWRYPHEFS GGQRQRIGLA RALTLDPELI VADEPVSALD VSIRSQILNL
MRETQRERGL SYLVISHDLS VVSYLADRIG VMYLGRLVEV GPTAAVIASP AHPYTRGLLR
SVPLPDPERE SAKRRLGAVI EGELPSALRP PTGCAFHQRC PFRVARCEVE APEARTLDDG
RVVACHRVDD VLAEPWSLED VGQMASALRA
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