Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0865 |
Symbol | |
ID | 8322928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 886173 |
End bp | 886613 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951998 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut |
Protein accession | YP_003109483 |
Protein GI | 256371659 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.518589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGACG AGGCGTTGAG TCTGCGGGTC AAGCGGCTCA GTCCCGGCGC AGTGCTGCCG TCGTATGCAC GGGCGCTCGA CGCGGGGCTC GATCTCGCCA GCATCGAAGA GAGGACACTG GCGCCGGGGG AGCGGCACGG GTTTCGAACC GGTCTCGCGC TCGAGCTTCC GGTCGGGACG CTGGGACTCG TCTTGCCCCG GAGTGGGAGG GCGCTTCGAG AGGGCCTCAC GGTGGTGAAT GCGCCGGGCC TGATCGACGC AGGCTATCGA GGCGAAGTAC TCGTGGCGCT GGTGAACCTT GGCGAGGCTC CAGTCGTGAT TCGGCCGGGC GAGCGCATCG CGCAGCTCGT GGTGCTGCCG TTCCCGAGCG TACGGGTGCT GGAGGTCACT GAACTTGCGG CGAGCGAACG CGGATCCGGA GGCTTTGGCC ACAGCGGCTG A
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Protein sequence | MVDEALSLRV KRLSPGAVLP SYARALDAGL DLASIEERTL APGERHGFRT GLALELPVGT LGLVLPRSGR ALREGLTVVN APGLIDAGYR GEVLVALVNL GEAPVVIRPG ERIAQLVVLP FPSVRVLEVT ELAASERGSG GFGHSG
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