Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0859 |
Symbol | |
ID | 8322922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 880595 |
End bp | 881257 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644951992 |
Product | Peroxidase |
Protein accession | YP_003109477 |
Protein GI | 256371653 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.778526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGCAG ATGCTCAGAC GCTGGGCGTG ATCAAGCTTG GTGATATTGC GCCCGACTTT GAGGCCGAGA CGACGAAGGG CAAGATTCGC TTCCACGAGT GGCTCGGCGA TGCCTGGGGC ATCTTGTTCT CGCACCCGCG CGACTTTACG CCGGTCTGCA CGACGGAGCT CGGTGAGGTG GCTCGCCTGC GCTCGGAGTT CGAGTCGCGT GGTGTTCGTG TCATCGGGCT GTCGGTCGAC GACGTCGAGT CCCACCACAC GTGGGAGGCC GACATCGCCG ACATCGCCGG CGCGGAGATG TGGTTCCCGA TGATCGCGGA TCCAGACCGG ACGGTGTCGT CGCTCTATGG GATGGTGCAC CCCAACGAGC TCGACTCGGC GACGGTGCGC TCGGTGTTCA TCATCGACCC CGCCAAGCGC GTACGCCTCA TGATCACCTA TCCCGCCTCG GTGGGTCGGA ACTTCGCCGA GATCGTGCGG GTGATCGATG CTCTCCAGCG GACGTCGCGC TACCCAGTGG TGACCCCAGC CAACTGGACG CCAGGCCAAC GTGTCATCCT CGCGACCTCG GTGCCGACCG ATCAGGCGCG TGCGGCGGTG GGCCACGACG CCGAGGAGAT TCGGCCGTAC CTGCGTCTCG TCGCCGACCC AGGCACCAAC TAG
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Protein sequence | MTADAQTLGV IKLGDIAPDF EAETTKGKIR FHEWLGDAWG ILFSHPRDFT PVCTTELGEV ARLRSEFESR GVRVIGLSVD DVESHHTWEA DIADIAGAEM WFPMIADPDR TVSSLYGMVH PNELDSATVR SVFIIDPAKR VRLMITYPAS VGRNFAEIVR VIDALQRTSR YPVVTPANWT PGQRVILATS VPTDQARAAV GHDAEEIRPY LRLVADPGTN
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