Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0654 |
Symbol | |
ID | 8322714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 663185 |
End bp | 664648 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951793 |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003109281 |
Protein GI | 256371457 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGCA GCTACGTAGT GCGCACCTTC GGGTGCCAGA TGAACGAGCA CGACTCCGAG CGCATTGCGG GCGTGCTCGA GGGGCTCGGG CTGACGCGTG GCGACGATCC CGCGGACGCC TCGGTCGTGG TCTTCAACAC CTGCACCATT CGGGCCAACG CCGACGAGCG TTTCTTCGGT CAGGTGAACC AGCTGCGAGA GGCACGTCGT CGCAATCCGT CGATGCGCAT CGTGGTCGCC GGGTGCTTGG CGCAAGGAGA AGGCGCAGGA CTGCTGGAGC GCGCGCCCCA CGTCGACGTG ATCGTCGGCA CGCACCAGGT TGGCCGCCTC GCTGAGCTCC TCGGTGCAGC CGATGGGGCG GAGGCGGTGG TGGACGTCCG TGAGCCCGAG CCGGGCAGCG TCGGTCTCGA CGACCCCACG CCGTGGGGCG AGGCGGTGAG CGAGGAGCCC TGGCGAGCGT GGGTCACGAT CCAGGTGGGG TGCGACAATC GCTGCGCGTT CTGCATCGTG CCGAGGGTGC GCGGACCGGA GGCCTCACGC CCATTCGATG CGATCGTCGC CGAGGTGCGC GAACTGGCCG CACGGGGCGT GAGCGAGGTC ACCTTGCTGG GTCAGAACGT GAACTCGTAC GGGCGCGATC TCGTGCTCGC GATGCGTCGG GCCGAGGACG AGCGCGAGCG GGCTCAGGTT GCGAGTCGTT CGGGGGTCGC CTTCCTCGGC CAGGGCGTGC CCAGGGTGCG TCCGCTGTTC GCGGATCTCG TGCGCGCGGT CGGGGCGGTG CCAGGGATTC GGCGGGTTCG GTTCACGTCG CCGCACCCCA AGGACATGCG TACCGAGACC TTCCAGGCCA TGGCCGAGAC CCCGACGGTG TGCGAGAGCC TGCACTTTCC GCTCCAGTCG GGGTCGGATC GGATCCTTGC CGCCATGCAC CGCGGCTACA GTGCGGATCG CTTCCTCGCC AAGCTCGCCG AGGCTCGTGC CACGATCGAC GATCTCGCCG TCTCGACCGA CATCATCGTC GGCTTTCCGG GCGAGACAGA CGCCGACTTC GAGGCGACGC TCGAGGTCGC GGCCGAGGCG GCGTTCGATC TCGCCTACAC GTTCATCTAC TCTCCCCGCC CGGGTACCGA GGCAGCGGCC CTCGTCGATC GGTTCGTCGA CCCGGACGTG GTGCACGAGC GCTTCGACCG CTTGGTGCGC GTCACGGAGC GCTCGGCGGC AGCGGCCCAT CGTGCCAGGG TCGGGCGAGA CGAAGAGATC CTCATCGAAG GTCCGAGCCG CAAGGATCCC CGGACGGCCA CCGCGAGGAC GCGTCAGCAC AAGCTCGTCC ACATTCCGGG GCTCGATGCG CGCGCGCTCG GGGGGCGCTA TGGGCGCGCG AGGATCGTCG ACGCGCGGGC ACACTATCTG ATCGGCGAGA TCATCGACGT CGAGCCCGGG GAGTCATCGC TCGTCGTGCC GTGA
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Protein sequence | MPSSYVVRTF GCQMNEHDSE RIAGVLEGLG LTRGDDPADA SVVVFNTCTI RANADERFFG QVNQLREARR RNPSMRIVVA GCLAQGEGAG LLERAPHVDV IVGTHQVGRL AELLGAADGA EAVVDVREPE PGSVGLDDPT PWGEAVSEEP WRAWVTIQVG CDNRCAFCIV PRVRGPEASR PFDAIVAEVR ELAARGVSEV TLLGQNVNSY GRDLVLAMRR AEDERERAQV ASRSGVAFLG QGVPRVRPLF ADLVRAVGAV PGIRRVRFTS PHPKDMRTET FQAMAETPTV CESLHFPLQS GSDRILAAMH RGYSADRFLA KLAEARATID DLAVSTDIIV GFPGETDADF EATLEVAAEA AFDLAYTFIY SPRPGTEAAA LVDRFVDPDV VHERFDRLVR VTERSAAAAH RARVGRDEEI LIEGPSRKDP RTATARTRQH KLVHIPGLDA RALGGRYGRA RIVDARAHYL IGEIIDVEPG ESSLVVP
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