Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0632 |
Symbol | |
ID | 8322692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 637453 |
End bp | 638739 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951771 |
Product | peptidase M50 |
Protein accession | YP_003109259 |
Protein GI | 256371435 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.39267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGAGG AGATGGAGGC GCCAACCCTC CAGGAGGCTC GAAGCTTCTC CGGTCGCAGG CTCGCCGAGC TCGTCGTCGT GCTCGTCGCC ATCATCGCGA TCGCCCAGCA CGCCCATGCA CTCGGCACCC TCGCCGTCGT GGCGGCGATC GTCGCGATGG TCGTGCTGCA CGAACTTGGG CACTACCTGG TCGCGCGGTG GTCGCGCATG GAGGTGACCG AGTTCTTCGT CGGGTTCGGG CCGCGGATCT TCTCGTGGCA CCGCAAGGGG ATCGAGTACG GCCTGAAGGC GATCCTCGTC GGTGGCTACG TCCGCATCAC CGGCATGACG AGCGCGGAAG AGGTCCCGCC CGAGCGTGAG GCGCGCACCT ATCGCTCGTC GACCTTCCCC CGACGAGTCG CGGTCAGCGT GGCGGGCTCG GTCATGCACT TCGTCGTGGC ATTTGGCATG CTGTGGTACC TGTTCAGTGG GGTCGGGACC TACGCGAGTC GGGGCGTGGT CATCGAGGGG GTCGCACACA TCCCAGGGGT GGTGACCCCG GCCGAGCGGA TCGGACTGCG TGCTGGCGAT ACGATCCTCG CCGTCGACGG GCATCGGAAC CCTACCCTTG CTGCCTTCGC GTCGTCGATC TCTCACCATC CCGGCACCCC TGTGCGCCTC GTTGTCGAGA CGCCCGGCGG TCGAGTCGTC TCGCGCACGG CGGTGCCGAT CCCCGCGACC ATGGTGGCGA GATACGATGC GGCCTATCAC TCCCTGGGTT CCCAAGGCGT GCTCGGCGTG GTGGTTGCGC CTCCAGTCGA ACGATCCAGT CTCGTCGGTG GGGTCGTGCC GTCGGCGCGC GCGCTCTGGT CGCTCGCTGG TGCGAGCGTG AGTGGGCTCG TGTCGCACTT CACGCCCCAT GGGATCGCGA CCTACGTGTC GGAGGTGACG CACCCCTCGG CGAACCCCAC CTCGGCAAAG TCCGCGTCTC GCTTCGAGTC CCCCGTGGGG ATCGTGCAGC TCGCGTCCGA CGCGGTCGCG GCCGGAACCG GCGCCGTGCT CGAGCTCCTC GTGCTGATCA ACGTCTTCGT CGGGATCTTC AACATGGTGC CGTTGCTGCC GCTCGACGGC GGACACGTCG CCATCGCGAT CTACGAACGC ATCCGATCGC GGCGAGGTCG TGCGTACCAC GCCGATGTCC TCAAGCTGAT GCCGATCACC TACGCTGTGA TAGCGGTGAT CCTCTTTCTG GGTGTCACCG CGCTGTATCT GGACATCACG CATCCGGTGC CCAACCCGTT CTCGTAG
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Protein sequence | MAEEMEAPTL QEARSFSGRR LAELVVVLVA IIAIAQHAHA LGTLAVVAAI VAMVVLHELG HYLVARWSRM EVTEFFVGFG PRIFSWHRKG IEYGLKAILV GGYVRITGMT SAEEVPPERE ARTYRSSTFP RRVAVSVAGS VMHFVVAFGM LWYLFSGVGT YASRGVVIEG VAHIPGVVTP AERIGLRAGD TILAVDGHRN PTLAAFASSI SHHPGTPVRL VVETPGGRVV SRTAVPIPAT MVARYDAAYH SLGSQGVLGV VVAPPVERSS LVGGVVPSAR ALWSLAGASV SGLVSHFTPH GIATYVSEVT HPSANPTSAK SASRFESPVG IVQLASDAVA AGTGAVLELL VLINVFVGIF NMVPLLPLDG GHVAIAIYER IRSRRGRAYH ADVLKLMPIT YAVIAVILFL GVTALYLDIT HPVPNPFS
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