Gene Afer_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0562 
Symbol 
ID8322621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp565308 
End bp565628 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content64% 
IMG OID644951700 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003109189 
Protein GI256371365 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTCG TAGGTCGTGT GGAGGACTTC GTCGACGCGA AGCCGCGTGC CGTCGAGGTC 
GACGGTCACC CGGTGTGTGT GGTGAGGATC GGCGATCGGT TCTTCGCGGT CGACGACATC
TGCTCCCATG CGCACTATCG GCTCTCCGAG GGCGATGTCT ACGAAGAGGA GCTCGAGATC
GAGTGCTGGA AGCACGGCTC GACCTTCTCG TTGCTCGACG GGCGGCCCCA GTCACTGCCG
GCGACGCGAC CGATCGGGGT CCATCGCATC AGCGTTCGTG AGGACGGCTC GGTCGAGGTC
GAACTCGGAG GGGACAAGTG A
 
Protein sequence
MAVVGRVEDF VDAKPRAVEV DGHPVCVVRI GDRFFAVDDI CSHAHYRLSE GDVYEEELEI 
ECWKHGSTFS LLDGRPQSLP ATRPIGVHRI SVREDGSVEV ELGGDK