| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0558 |
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| Symbol | |
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| ID | 8322617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 561004 |
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| End bp | 561717 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644951696 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003109185 |
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| Protein GI | 256371361 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGTT TGCGCAAGCC AGCGAAGGGC GTTCGCGTGC TCGTGGTCGA CGATGAGCTG
CCCATCACCG AGCTCCTGCA GATGGCGCTC ACCTTCGAAG GCTATGACGT GAGCGTCGCT
TCGTCCGGCC GCGAGGCTCT CGACGTACTC CGGACCGTGA AGCCAGACCT GCTCATCCTC
GACGTCATGA TGCCAGGGAT GGATGGCTTC ACCCTGCTCC GTCGTCTGCG AGAAGAGCGC
AACGACGTCC CCGTGCTCCT GCTCACCGCG AAGGACGCCG TCGAGGACCG CGTCCAGGGC
CTCCAGCTCG GCTCGGACGA CTACGTCACG AAGCCCTTCT CGTTGGCAGA GCTCGTGGCG
CGCGTCGAGG CGATCCTGCG ACGCTCCGGC CAGGGGACGG GTGCGCCCAC TCGGATCGTC
GTCGGCGACC TCGTCCTCGA CGAGGATGCC CACCAGGTGC TGCGAGCGGG ACACGAGATC
GAGCTCACGG CGACCGAGTT CAAGCTGCTG CGCTACCTCA TGCTGAACGC GAACAAGGTG
GTCTCCAAGG CGCAGATCCT CGACCACGTC TGGCAGTACG ACTTCGGCGG CGACGCAAAC
ATCGTGGAGA CCTACATCTC GTATCTGCGC AAGAAGCTCG ACGGCTACGG TCCACCGATG
ATCAAGACCG TCCGCGGCGT CGGCTACTCC CTCCGTGCGG CGGAGTCGGC GTAG
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| Protein sequence | MDSLRKPAKG VRVLVVDDEL PITELLQMAL TFEGYDVSVA SSGREALDVL RTVKPDLLIL
DVMMPGMDGF TLLRRLREER NDVPVLLLTA KDAVEDRVQG LQLGSDDYVT KPFSLAELVA
RVEAILRRSG QGTGAPTRIV VGDLVLDEDA HQVLRAGHEI ELTATEFKLL RYLMLNANKV
VSKAQILDHV WQYDFGGDAN IVETYISYLR KKLDGYGPPM IKTVRGVGYS LRAAESA
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