| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0470 |
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| Symbol | |
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| ID | 8322529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 470928 |
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| End bp | 472418 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644951621 |
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| Product | phytoene desaturase |
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| Protein accession | YP_003109110 |
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| Protein GI | 256371286 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTA TCATCGTCGT CGGCGCTGGG TTCGCCGGAC TCTCCGCGGC CTCGAGGCTG
GCGGCCGCAG GTCATCGGGT GACCATTCTC GAGCGTCGCT CGCGCCCAGG GGGGCGAGCC
GACGCCGTGC GCATCGACGG GGCGACGCTC GACCTCGGCC CCGTCGTGCT CACCATGGTC
GGTACGCTGC GATCGATCTG GCGCGCGGCG GGCCGCAACC TCGACGACTA CCTCGACCTC
ATCCCCGTCG AGCCCGGTTA CCGGCTCGCG TTCGCAGACT CGACGGGCCC TGATGGCGCG
GGGGTGCTGC GAACCTGGAG CGATCGCGAG CGCATGGCCG AGGAAGTCCG TGCCTTCGCC
GGCACGCGGG CCCTGGACGA GTGGCAGCGC TGGGCCCGCT GGCTCGAGGA GCTCGCCGGG
ACGGAGCTGC CGACCTTCAT CGAAGCCGAC GTCGCCAGCG TCGACCGACT GCTCACGCGC
GCACCCGCGC TCTGGCGTCT GTGGCGACTC GGCGCCTTCG GACGCTTGGA TGCTCGTGCG
GCCCGCGTCC TGTCCGACCC GAGGCTTCGC CGGGCGGTCA CCTTCCAGGC GCTCTATGCC
GGCGTCTCCC CGCAGCGAGC ACTCGGGCTC TTCGGCGTCA TCGCCTACAT GGACGTGGTC
CTCGGCGTCG TTTTTCCACG CGGCGGCATG GCGGCCCTCG GTGAGGCGCT CGGGCGCCTG
TGCGAGGACC TGGGCGCCGA GCTGCACCTC GACGAGCCGG TGACGCACTA CGAACGCACC
GGGAGCCGCA TCAGCGCGGT CACGACGCCA CAGGGGCGCT ACCCGGCCGA CGTCGTCGTC
ACGACCGAGG ACCCGCTCGG CCTCGGTCGA CGTCTCGGCC TCGGCTACGC CAAGCGACGG
TGGCGCCTCG CACCCTCGGC CCTCGTCGTG GTGCGCTACG AGGACGCCCC GCTTCCCGCG
GACCTCGAGC ACCACAACGT GTTCTTCGGG CAAGCGTGGG AGGAAGCCTT CGACGACCTC
ATCGAGACCC GGCGCCTCAT GCGAGACCCC TCGACGCTCG TCTCGCTGCC CCAGCGCACC
GATCCGACGA TCGCGCCCCG TGGCCGTGTC GTCTACGCCC TCGAGCCCGT GCCGAACCTG
AACGGCCAGC TCCGCTGGCC CGAGGACGCG GCTGCGGCGC GCGAACGCCT CGAAGAGCGT
CTCGGCACCT TCGGACTGGC TCGTCGTTCG GACCCCATCT CCGAGATCGT GCTCGACCCC
GAGGCGTGGG CTGCCCAGGG CATGGACGCC GGGACGCCGT TCTCGTTCGC GCACACCTTC
TGGCAATCGG GCCCGTTCCG CGCGCCGATG GCCCCTCGCG AGTTCGACAA CCTCGTCCTC
GCAGGATCGG GGACGCACCC GGGCGTCGGC GTTCCGCTCG CGCTCACCTC GGGTCAGCTC
GCCGCGGCTC GCGTGCTCGC CGACCACCCG GGAAGCATGG TACGTCGATG A
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| Protein sequence | MARIIVVGAG FAGLSAASRL AAAGHRVTIL ERRSRPGGRA DAVRIDGATL DLGPVVLTMV
GTLRSIWRAA GRNLDDYLDL IPVEPGYRLA FADSTGPDGA GVLRTWSDRE RMAEEVRAFA
GTRALDEWQR WARWLEELAG TELPTFIEAD VASVDRLLTR APALWRLWRL GAFGRLDARA
ARVLSDPRLR RAVTFQALYA GVSPQRALGL FGVIAYMDVV LGVVFPRGGM AALGEALGRL
CEDLGAELHL DEPVTHYERT GSRISAVTTP QGRYPADVVV TTEDPLGLGR RLGLGYAKRR
WRLAPSALVV VRYEDAPLPA DLEHHNVFFG QAWEEAFDDL IETRRLMRDP STLVSLPQRT
DPTIAPRGRV VYALEPVPNL NGQLRWPEDA AAARERLEER LGTFGLARRS DPISEIVLDP
EAWAAQGMDA GTPFSFAHTF WQSGPFRAPM APREFDNLVL AGSGTHPGVG VPLALTSGQL
AAARVLADHP GSMVRR
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