Gene Afer_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0429 
Symbol 
ID8322488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp428721 
End bp429185 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID644951581 
Productribosomal protein L13 
Protein accessionYP_003109070 
Protein GI256371246 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.669525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACGT ACAGTCCCAA GGCGGCTGAG ATCAGCCGCA CCTGGTGGGT GGTGGACGCG 
GAAGACGTCG TCCTCGGACG GCTCGCAACC GAGGTGGCTC GGGTGTTGCG CGGGAAGCAC
AAGCCGACGT TCACGCCGCA TCTCGACATG GGCGATCACG TCATCGTCGT GAACGCGGAC
AAGATCCGGG TCACCTCCGA CAAGGGTGCC ACGAAGCGCT ACTGGCGTCA CTCGGGTTAT
CCCGGCGGCA TTCGCTCCGA GACGCTGGCG GAACGGCTCG CACGCCACCC CGAGCGGGTC
GTGGAGGCCG CGGTGCGGGG CATGCTCCCG AAGAATCGCC TCGGCAGGGC GATGTATCGC
AAGTTGAAGG TCTACGCCGG CCCCGAGCAT CCGCACCAGG CGCAGCAGCC TCGAGTCCTG
TCGCTCGGTC AGCCGAGCCT CGTCACCCAA GGGGAGCACG CATGA
 
Protein sequence
MRTYSPKAAE ISRTWWVVDA EDVVLGRLAT EVARVLRGKH KPTFTPHLDM GDHVIVVNAD 
KIRVTSDKGA TKRYWRHSGY PGGIRSETLA ERLARHPERV VEAAVRGMLP KNRLGRAMYR
KLKVYAGPEH PHQAQQPRVL SLGQPSLVTQ GEHA