Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0413 |
Symbol | |
ID | 8322472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 419252 |
End bp | 419791 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951565 |
Product | ribosomal protein L6 |
Protein accession | YP_003109054 |
Protein GI | 256371230 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGGA TTGGGAGGCA ACCCATCGCG GTGCCTGGCG GCGTCGAGGT GGCGGTGGAT GGCCAGCACG TGTCGGTGCG CGGGCCGAGG GGTTCGCTCG CTCGCGACCT GCCGCCGGAG GTCACGGTGA GCGTGGTCGA CAGCGTGGTG CACGTCGAAC GGAGCGATGA CTCGAGGCGC GCTCGGGCCA TGCACGGGCT CTCACGGACG CTGGTCGCGA ACATGGTGCG CGGTGTGGCC GAGGGCTACG AGAAGACACT GGAGATCATC GGAACGGGCT ATCGCGCCCA GGCGCGTGGC ACCGGCGAAC TCGAGCTCGC GCTCGGCTTC TCGCACCCAG TCGTGGTCGA GGCGCCCGAT GGCATCGCGT TTGCGACGCC GACGCCCCAG CGCGTCGTGG TCTCGGGCAT CGACAAGGAA CTCGTTGGAC AGGTGGCGGC CAATATCCGC CGCATCCGCA AGCCAGAGCC CTACAAGGGC AAGGGTGTGC GCTACCTCGG CGAGCGGGTT GTCCGTAAGG CCGGCAAGGC CGGGAAGTAG
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Protein sequence | MSRIGRQPIA VPGGVEVAVD GQHVSVRGPR GSLARDLPPE VTVSVVDSVV HVERSDDSRR ARAMHGLSRT LVANMVRGVA EGYEKTLEII GTGYRAQARG TGELELALGF SHPVVVEAPD GIAFATPTPQ RVVVSGIDKE LVGQVAANIR RIRKPEPYKG KGVRYLGERV VRKAGKAGK
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