| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0378 |
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| Symbol | |
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| ID | 8322433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 388694 |
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| End bp | 391510 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951526 |
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| Product | protein of unknown function DUF470 |
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| Protein accession | YP_003109019 |
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| Protein GI | 256371195 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2898] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.173445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTCGG CGCCCCTCGA GGTGCGCCTC GCGCCCGGCG CGCGCGTCGT CGTCCTCGGC
AATCTCGACC TCCACGATCG GCGCCCAGGC CCCGATCGTG ACGAGCTCGC ACGCATCATC
GGGGAGCTCG AGCCCGATGA CCTGCTCGTC CTCGCTGGGC GCGTCACCGC ACCCGAGCCG
AGTCTCGACC CACGCTCCGC ACTCGGGCAC CACCACGACG TCGTCGACCT GCTCACGAGC
GCCCGCGCAC GCACCGTACG CATCACCTCC GTGCGCGACG AGCCTCTGGC AATGGGGGCC
GAGGTAGAAC ACACCGCCGA GCTGATCCTC CTCGGGCCAG GGCCCCGCGG CCATCGCGTC
CGCATGAAGC CGGTCGGCAC GGATCTCGCA CGACGGCGCA CGCTCGAAGC GCTCGAACGA
CTCCCAGGCT TCCGTGGCGC TGCCTGGCTC GATCCGGCCG CCTCCGTGAC CCACTTCGTC
GTGGCGCGTT CGTTCGCACG GCGTGCACGC ATGCTCGCGT TGTGGGTCTT CGTCCCGCTC
GTCCTGCTCG AGCTGGCCCG GCTGCCGTTC GTGCTCAGGG CCGCACCGCT CGTCGCACAC
CTCCACCACC AGGCATCGCG CCACATCGCC CTCGTCGCGA GTTTCCTCGT CCTCGATGCC
CTCATCGTGC TCCTTGCCAG CGTCCTCGCT TCGCGGTCGG TGACCCACCT CATCGAGGAG
CCGATGGAGT CGATGGTGAG CGCACTGGCC ACCAACCAAG CCGCGCGTGA TCTGTTCGAG
AGCCTCCCAC CGCACACCTC GCTCATCGCC GCCCAGGCCG AGCTCGCCGA ACTCCAACAC
GACGACGACG CCTTCCTCGC CTCGCCAGGA CCGACCACGG CCGTGCTCAC GCCCGTTGCC
GGCAGAGGTC TGCTCCCCAC CCGCTACGAG CCCATGTACC ACACGACGTG GATCGAGCTC
GAGGTCGGCG CGGTCGTGCG CGCCTACCTG CGCCGGACGC GCCGTCGCGT TCGCCCGCCG
AACGCGCTCT CGCGCCTGCT CTGGCCCGAT CAGGCCCTCC TCGATCATCA GGTGACGCTC
GCGGGCGCCC CTGACGGCGG TTCGTGGCCC CCCGCGCCCA GGCTCGCCTC CGAGACCTCG
CTCACGGTGC GCCGTGTCGG GGGACTTGCG GTCAGCGTCG CCGGTCTCGT GGAGGTGATC
TCGGCGTTCG CACCCCCATT GGCACGACAC CTGTCGATCG TCACCACACT CTTCCCTACC
CTCGGACCGA TCCCTCGCTA CGCCGACGCG ATCTCGGCGG CCGCCGGCAC GCTGCTGCTC
GGCATCGCCC AAGGGCTCCG AGCCGGTCAA CGACGGGCGT GGCGGATCGC CATGGTGGTC
CTCGCAGCAG CGGTCGCCTC CAACCTGGTC CGCCGCAGCG ACCTCATCAC GACCGGCCTC
CTCAGCCTCG CGCTCGTCGC GCTGGCCATC TGGCGAAGCG CCTTTCGACA ACCCGCCCCC
AGGGGCCGAC GAGTGTGGAG GGCACTCTCG GTCGTGGGCG CCGGCGTCTT GGTCGTCCTC
GTCGCCGAAG TCGTCGCGAT CGGCGATGCC CTCGTACACC ATGCACCTCT CCGTCCCCTC
GCGGCCCTCG GAGGGATCAT CGGCACCGTG CTCGGTCTTC CGGTTCAAGC ACCGCCGCCA
TTCGCGGTCG GTGAGTTGCA AGACGCACTC ACGCTGGTCG GCGTCGCACT CCTCGTCCTC
ATCGTGTGGC GCCTCGTGGC ACCCGTGCGC GATCGCCTCA GCGCGCAGCT CGCCTCCCTC
AGAGCGCCCC GCAATCCCGC ACAGATCCTG CGAGCCCACC CACAGAGCAC ACTGGACTAC
TTCGCGCTGC GCTCCGACAA GGAGCACCTC GTGCGTCATG GCGGCCTCGT GGCCTACGGC
GAGTTCGGCT CCGTCGTCAT CGTCTCCCCA GACCCCATCG GAGCGACCGC CTCGGCACGC
CTCGCCTTCC TCGAGCTCTT CGAGGCCACG TCTCGCGCCG GGAAGGCACT GTGCGTCCTC
GGGGCGAGCG AGACCTGGAG CGAGTGGTAC CGCGAGGTCG GCTTGCATCC CCTCTACCTC
GGTGACGAGG CGATCGTCAC GCTCGGTCAA CTCGACCTTG CCGGCAAGCG CCACAAGAGT
CTGCGCCAGG CAGTCAATCG GATGCGCCGT TACGGCTACC GCGTGCGGGT CGTCGCTCCG
CTCGAGCTCA CCGAAGAGGA GCGGCGCGAC GTGCTTCGCG TCATGAGCGA GTCACGCCGC
GGCGGCCGAG AACGCGGGTT CTCGATGACG CTGGGGCGCG TCTTCGACCC CCGCGACACC
GACGTCCTCA TGAGCGTGTG CACAGGACCC GACGGCCGGA TCGTCGGGTT CGTGCAGTGG
GTCCCCGCGC CGAGCATCGA GGGCTACTCG CTCGACCTGA TGCGTCGCGA CCTCGGCAAC
CATCCGAACG GCATGTTCGA CCTGCTCATC GTCGAGACCA TGACGCAGCT CCAAGCCCGC
CACGTCAAGG CGATCAGCCT CAACTTCGCT GCAATGCGGG GCGTGCTCGC CGGTGAACGC
GGCGGCGAAC TCCTGAGCGC CCGAGTCGAG CGCTGGGTGC TCGATCGGCT CTCGTCGAGC
ATGCAGATCG AGTCGCTCTG GCGCTTCAAC GCGAAGTTCG AGCCCCGCTG GGAACCCCGC
TACCTCGTCG TCGACGCCTA CGAGCACCTC GCCGCGATCG CGATCGCCGC AGCACGCGCC
GAGTCACTCT GGGACCTGCC GCTCGTCGGA CGCTTCCTGG CGGACCCCCA TGCATGA
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| Protein sequence | MESAPLEVRL APGARVVVLG NLDLHDRRPG PDRDELARII GELEPDDLLV LAGRVTAPEP
SLDPRSALGH HHDVVDLLTS ARARTVRITS VRDEPLAMGA EVEHTAELIL LGPGPRGHRV
RMKPVGTDLA RRRTLEALER LPGFRGAAWL DPAASVTHFV VARSFARRAR MLALWVFVPL
VLLELARLPF VLRAAPLVAH LHHQASRHIA LVASFLVLDA LIVLLASVLA SRSVTHLIEE
PMESMVSALA TNQAARDLFE SLPPHTSLIA AQAELAELQH DDDAFLASPG PTTAVLTPVA
GRGLLPTRYE PMYHTTWIEL EVGAVVRAYL RRTRRRVRPP NALSRLLWPD QALLDHQVTL
AGAPDGGSWP PAPRLASETS LTVRRVGGLA VSVAGLVEVI SAFAPPLARH LSIVTTLFPT
LGPIPRYADA ISAAAGTLLL GIAQGLRAGQ RRAWRIAMVV LAAAVASNLV RRSDLITTGL
LSLALVALAI WRSAFRQPAP RGRRVWRALS VVGAGVLVVL VAEVVAIGDA LVHHAPLRPL
AALGGIIGTV LGLPVQAPPP FAVGELQDAL TLVGVALLVL IVWRLVAPVR DRLSAQLASL
RAPRNPAQIL RAHPQSTLDY FALRSDKEHL VRHGGLVAYG EFGSVVIVSP DPIGATASAR
LAFLELFEAT SRAGKALCVL GASETWSEWY REVGLHPLYL GDEAIVTLGQ LDLAGKRHKS
LRQAVNRMRR YGYRVRVVAP LELTEEERRD VLRVMSESRR GGRERGFSMT LGRVFDPRDT
DVLMSVCTGP DGRIVGFVQW VPAPSIEGYS LDLMRRDLGN HPNGMFDLLI VETMTQLQAR
HVKAISLNFA AMRGVLAGER GGELLSARVE RWVLDRLSSS MQIESLWRFN AKFEPRWEPR
YLVVDAYEHL AAIAIAAARA ESLWDLPLVG RFLADPHA
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