| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0325 |
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| Symbol | |
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| ID | 8322380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 336915 |
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| End bp | 338348 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951473 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003108966 |
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| Protein GI | 256371142 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.184754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC GATCCGTCGA CGCGGCCCTC GACGAGGCGC CGCTGAGTCG GTTCCACACG
AGGTCGATCT TCGTCGCAGG CATGGGGTTC TTCACCGATG CCTACGACTT GTTCATCATC
GGCACGGCGA CGACCTTGAT CGCGAAGCAG TGGGGGCTCT CGTCGACCGA GACCGGCCTC
ATCAATTCGA TCACGTTGCT CTCGGCCTTC TTCGGAGCGG TGATCCTCGG GCGGCTCGCG
GATGTCCTCG GCCGCAAGCG CACCTACGGT CTCGAGGCCG GGCTCATGGT GCTCGGAGCG
GTCGCCTCGG CGTTCTCCCC GAGCCTCATT TGGCTGCTCG TCTTCCGGTT CATCCTCGGT
CTCGGCGTCG GGGGCGACTA CCCGATGTCG GCCGTGCTCA TGACCGAGTA CGCCAACGTG
CGCTCGCGCG GTCGGCTCGT CGGGCTCGTC TTCTCGATGC AGGCACTCGG TACCGTCGCT
GGGTACGTGG TCGCGCTCGC GCTCTTGTCG GCGGGCGTCA ATCATGACCT CGCTTGGCGC
CTGATGCTCG GCCTCGGTGC GGTTCCCGCG GCGGCGGTCA TCTACCTGCG CCGCAAGATG
CCTGAGTCGC CTCGCTACCG CGCTCGCGTG GAGGGCGACG CTGCGACCGC AGCGCGCGAC
CTCAAGGCGT ACTCGGGCGG TGTCGTGGAT GCGGCCGCGG TCGCCGAGCC GACCTTGCGC
CTGCGCCTCG GTCAGTTCCT CTCGAACCGC ACCTACCTCC TGTATCTGCT GGGTACGGCG
GGCAGCTGGT TCGTGTTCGA CTACGCCTAC TACGGCAACT CGGTCTCGGC TCCTCTGATC
GTCAAGAGCG TGCTCGGTAA GCACGGGGCG CACGTGCTCA CGGAGGCGAT CGCGCTGCAG
CTCATCGTCT TCACGGTGGC GGCGGTTCCG GGCTACTACC TCGCCTCGTT CTTCATGGAT
CGGATCGGTC ACAAGCGCCT GCAGCTGATC GGCTTCACGT TCATGGGCCT CGCTTTTCTC
CTCATCGGGG TGATCCCCGG GGTGACCCAC GACGTGCTGC CGTTCCTGGT GCTCTTCGGC
GTGAGCTACT TCTTCGCGGA GTTCGGTCCG AACCTCACGA CGTTCGTGCT CGCTGCTGAG
GTGTACCCGA CGAGCGCCCG CTCGACTGGC CACGGTCTCT CGGCGGGGAT CGCGAAGTTC
GGTGCGTTCC TCGGTGTCTT CATCTTCCCG ATCGTCAAGA GCGCGTTCGG CGTGGGTGGA
GCCCTGGAGT TCTCCTTCGG CATGGCGGTC CTCGGCCTCC TCGTGACCCT GGTGCTTCCT
GAGCCTGCGC AGCGTTCCCT CGACGACGTC ACCGGCGAGC TCAAGCTCGC AGAGGCGGCC
CAGGAGTACC TGCGCCGGGC TTCGAACCAG CAGCGGATGG CCGGACAAGA CTGA
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| Protein sequence | MSDRSVDAAL DEAPLSRFHT RSIFVAGMGF FTDAYDLFII GTATTLIAKQ WGLSSTETGL
INSITLLSAF FGAVILGRLA DVLGRKRTYG LEAGLMVLGA VASAFSPSLI WLLVFRFILG
LGVGGDYPMS AVLMTEYANV RSRGRLVGLV FSMQALGTVA GYVVALALLS AGVNHDLAWR
LMLGLGAVPA AAVIYLRRKM PESPRYRARV EGDAATAARD LKAYSGGVVD AAAVAEPTLR
LRLGQFLSNR TYLLYLLGTA GSWFVFDYAY YGNSVSAPLI VKSVLGKHGA HVLTEAIALQ
LIVFTVAAVP GYYLASFFMD RIGHKRLQLI GFTFMGLAFL LIGVIPGVTH DVLPFLVLFG
VSYFFAEFGP NLTTFVLAAE VYPTSARSTG HGLSAGIAKF GAFLGVFIFP IVKSAFGVGG
ALEFSFGMAV LGLLVTLVLP EPAQRSLDDV TGELKLAEAA QEYLRRASNQ QRMAGQD
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