Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0312 |
Symbol | |
ID | 8322367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 326198 |
End bp | 327955 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951460 |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_003108953 |
Protein GI | 256371129 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGTGA ACGTTCACCA TCACAGCTAC GACGTCGTCA TCGTGGGCGC AGGCGGAGCC GGCCTGCGCG CGGCGATCGA GACGGCCGGG ACCGTGCGCA CCGCGGTGAT CACGAAGCTC TATCCGACCA GGTCGCACAC CGGGGCGGCC CAAGGTGGCA TGTGCGCGGC GCTTGCCAAC GTCGAGGAGG ACTCGTGGGA GTGGCACGCC TTCGACACGG TGAAGGGGTC TGACTACCTC GGTGACCAAG ATGCCATCGA GATCATGTGC CGAGAGGCGA TCGACGCGGT CATCGATCTC GAGCACTTCG GGCTGCCGTT CTCGCGCACC CCGGACGGCA AGATCGACCA GCGCCGCTTT GGTGGCCATA CGCGCAACCA TGGCGAGGCT CCGGTACGTC GCGCGTGCTA CGCGGCCGAT CGCACCGGTC ACATGATCTT GCAGACGCTG TTCCAACAGT GCGTCGCTCG TGGTGTCCAA TTCTTCAACG AGTTCCAGGT GTTCGACGTC CTCTTCGAAG GCGAAGGGAA CGATCGGCGT GCTGCGGGCG TCGTGGCCTA CGAGCTCGCG ACGGGAGATC TCCACGTCTT CGCCGCGAAG GCGGTGATGT TCGCGACCGG GGGATTCGGC CGTGTCTTTC AGATCTCCTC GAACGCACAC ACGCTCACTG GAGATGGTCC CGCAGTGCTC CTGCGGCGCG GGGTGCCGCT CGAGGACATG GAGTTCTACC AGTTCCACCC AACCGGCATC TACGGGATCG GCATCTTGCT CACCGAGGGT GCCCGTGGCG AGGGTGGCAT CTTGCGCAAC GGACTCGGCG AGCGCTTCAT GGAGCGCGTC GCGCCGACGG TGAAGGACCT CGCCCCGCGC GACATGGTCG CGCGAGCGAT TCACGCCGAG ATCCGTGAGG GTCGCGGGGC CGGGCCTGAC AAGGACTATG TCTATCTCGA CCTCACGCAT CTACCGCCGG AGCAGATCGA CGCGAAGCTC CCCGACATCT CGGGGTTCGT GCGGACCTAT CTCGGCCTCG AGCCCAAGCG GGATCCGATC CCCATTCAGC CGACGGCACA CTACGCCATG GGCGGTATCC CGACCAACGT GCATGCCGAG GTCGTCGTCG ACCCGGCGGG GACGGTGCTG CCAGGGCTCT ACGCGGCCGG GGAGTGTGCC TGCGTGTCCG TCCACGGGGC CAACCGGTTG GGGACCAATT CCCTGCTCGA CATCAACGTC TTCGGGCGTC GCGGTGGGCG AGCGATGGTC GAGTACGTCG CTGGCGTCGA TCACCCCGAC ATCGCCCGAG GCGCCGAGGA GCCCGTTCGT GAGCACATTG AGCATCTTCG GAGCCACAAG GGGTCCGAGC GTGTCGGCGC GTTGCGGACG ACGCTGCAGG CTGCCATGAT GCGCGATGCG TCGGTCGTGC GCACTGGGGA GTCGCTCGCC GAGGCCCATC GTGTGATCCG CGAGCTGAAG GAGCGCTACC ACGACGTCGC CATCGACGAC AAGGGATCGG TCTTCAACTT CGATCTCACG GAGGCGCTCG AACTCGGGAA CCTGCTCGAC CTCGCCGAGG TGCTCGTGAT CGGTGCGGAG GCTCGCACCG AGAGCCGTGG CGCCCACTGG CGTGACGACT ACCCCACTCG TGACGACGTG AACTGGATGA AGCACACGCT TGCCTACCGC GAGCCGGACG GATCGATCCG GCTCGACTAC AAGCCAGTGG TGTTGGGCAA GTACGAACCT ATGGAGCGCA AGTACTGA
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Protein sequence | MGVNVHHHSY DVVIVGAGGA GLRAAIETAG TVRTAVITKL YPTRSHTGAA QGGMCAALAN VEEDSWEWHA FDTVKGSDYL GDQDAIEIMC REAIDAVIDL EHFGLPFSRT PDGKIDQRRF GGHTRNHGEA PVRRACYAAD RTGHMILQTL FQQCVARGVQ FFNEFQVFDV LFEGEGNDRR AAGVVAYELA TGDLHVFAAK AVMFATGGFG RVFQISSNAH TLTGDGPAVL LRRGVPLEDM EFYQFHPTGI YGIGILLTEG ARGEGGILRN GLGERFMERV APTVKDLAPR DMVARAIHAE IREGRGAGPD KDYVYLDLTH LPPEQIDAKL PDISGFVRTY LGLEPKRDPI PIQPTAHYAM GGIPTNVHAE VVVDPAGTVL PGLYAAGECA CVSVHGANRL GTNSLLDINV FGRRGGRAMV EYVAGVDHPD IARGAEEPVR EHIEHLRSHK GSERVGALRT TLQAAMMRDA SVVRTGESLA EAHRVIRELK ERYHDVAIDD KGSVFNFDLT EALELGNLLD LAEVLVIGAE ARTESRGAHW RDDYPTRDDV NWMKHTLAYR EPDGSIRLDY KPVVLGKYEP MERKY
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