Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0212 |
Symbol | |
ID | 8322265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 215819 |
End bp | 218005 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951359 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_003108854 |
Protein GI | 256371030 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.432304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCG CTTCGCCAGA GGAGCTTGCG GAGTTCCTTG CGGAGTCACA GGAGAACTTG GACCGCTTCG ATCGTGACGT ACTCGCGCTC GAGTCGGACC CGTCCAACCG TGACGCGGTG GCCTCGGCCT TCCGCGCGAT CCACACGCTG AAGGGCACAT GCGGCTTCCT CGGCTTCGGC CGTCTCGAGG GGCTCGCGCA TGACGGGGAG AGCTTGCTCG CACGGGTGCG CGACGGGGCG GTGCGAGTGG ACGCCGCGGT AGCAGACGCG TTGCTGGCTC TCGAGGACGC GGTTCGCAGG AGTCTCGACG CCATCGCCGC CACCGGCGAC GAGGACGACG AGCACTGGGA GGAGCTCCGC GCACGCTTGG TTGCGCTCGC GGAGCAGGCC CACGAGGCGC CGCGGTCGGT CGCGGGCGCG AACGCCGTCG TCTTCGCGCC AGCGCCATCG TCGGGCGCGC CTGCCGAGCT CTCGTCGGGA CCCGAGTCGC AGGCGTCCGT CGAGGGCGAC GTGGCGCGCG GCGCCGAGCC GGATGGGAAG TCTGGCGCTC GGCCGACACT CGGCGAGACC GCGGTGCGCG TGGACGTCGG GCTCCTCGAC CGTCTCATGA ACCTCGTTGG GGAGCTCGTG CTCGCGCGCA ATCGGGTCAT GCAGCTCGCC CAATCCGAGG GCAGTGCGGC GCTCGCAGCG AGCACGCAGC AGCTCAGCAT CATCGCCTCC GAACTGCAAG AACAGGTCAT GAAGACGCGC ATGCAGCCGA TCGACACCCT GTTCGCGAAG TTGCCTCGAG TCGTCCGCGA CCTCGCCAGG GAACTCGGTC GCGAGGTCGA ACTCGTCCTC GAAGGGCGCG ACACCGAGCT CGACCGCACG ATCATCGAGG CGATCCGCGA TCCCATGACG CACCTCATCC GCAACGCCAT CGACCACGGC ATCGAGCCAC CCGACGAGCG CCGGTCCCAG GGCAAGGCGG CCCATGGCGT CCTGCGCATC GACGCCTACC ACGAGGGCGG GTCGGTGATT ATCGACGTGA GCGACGACGG GCGAGGCATC GATCTCGAAG CCGTGCGGGC TCGTGCGCTC GCCCGCGGTC TCGTGCACGC CGACGAGCTC GCACGACTCG GGCCGCGGGA GGTGGCCGAG CTGATCTTCG TGCCCGGGTT CTCCACCGCG ACGACCGTCA GTGCGGTGTC CGGCCGTGGC GTCGGCATGG ACGTGGTCAA GACCAACGTC GAGAGCGTCG GCGGCAGCAT CGACATCGAC TCGGATCCGG GCCGAGGTAC GCGGATGCGG CTGCGCATCC CGCTGACGCT CGCGATCATC CCGGCGCTCA TGGTCGAGAC GCACGGGCAG CGCTTCGCGA TCCCGCAGGC GGCGCTTGCC GAGCTGGTGC GGCTCGAGCT CGATGGTCGG CACTCGCTGG TCGAGATCGT CGACCACACC CCCGTGCTCC GCCGACGCGA CCGTCTGGTT CCGTTGCTCG ACCTCGGAGC GATCCTCGGG CTTGCGCCGC CCTTCCCCGA GCGAGGACTC GATGCGGTGA GCGTGGTGAT CTTGAGCGCT GGCGCCACGA GCTTCGGGAT CGTCGTCGAT CGGATCGTCG ACACGCAAGA GATCGTGGTC AAGCCGCTCG GACAGTTCGT GAGCCAGCTC CAGTGTTACT CCGGGGCGAC CATCCTCGGC GACGGGCGGG TCGCGCTCAT CGTGGACGTT GGCGGGATCG CGCAGCTCGG CGGTCTCGCG GTGGAGCGTG CACACGAGAC GACGTCCGAG TCGGTAGGGG AAGCCGAGTC CGAGGCTGAG CCCGTGATCG TCCTTGCTGC GGGCGGGACG GAGCGACTCG GGGTTCGTCT CCGCGAGATC GAGCGCCTCG AAGAGTTCGC GCTCGGCGCG GTCGAGTACG TTGAAGGGCA CGAGGTCGTT CAGTATCGCG GTGGCGTCAT GCGTCTCGTC CGCCTCGCTC ACCTGGTCGG GCTGGCGTCC CAGCCTGCGC GCCCCGACCC GATCAACGTG ATCGTGGCCG TTGATCCTGC TGGGCAGCTC GTCGGGCTCG TCGTCGACGA GGTGCTCGAC ATGGCGCTCG CCCCGGTGAG CAGGACGCAC GGCGCGATCG TGCTCGACGG CAAGCTCGTC CGGGTCCTCG AACTCGACGC GCTGCTCGAG CGTGCGGGTG AGGTGAGCCA TGTCTGA
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Protein sequence | MTGASPEELA EFLAESQENL DRFDRDVLAL ESDPSNRDAV ASAFRAIHTL KGTCGFLGFG RLEGLAHDGE SLLARVRDGA VRVDAAVADA LLALEDAVRR SLDAIAATGD EDDEHWEELR ARLVALAEQA HEAPRSVAGA NAVVFAPAPS SGAPAELSSG PESQASVEGD VARGAEPDGK SGARPTLGET AVRVDVGLLD RLMNLVGELV LARNRVMQLA QSEGSAALAA STQQLSIIAS ELQEQVMKTR MQPIDTLFAK LPRVVRDLAR ELGREVELVL EGRDTELDRT IIEAIRDPMT HLIRNAIDHG IEPPDERRSQ GKAAHGVLRI DAYHEGGSVI IDVSDDGRGI DLEAVRARAL ARGLVHADEL ARLGPREVAE LIFVPGFSTA TTVSAVSGRG VGMDVVKTNV ESVGGSIDID SDPGRGTRMR LRIPLTLAII PALMVETHGQ RFAIPQAALA ELVRLELDGR HSLVEIVDHT PVLRRRDRLV PLLDLGAILG LAPPFPERGL DAVSVVILSA GATSFGIVVD RIVDTQEIVV KPLGQFVSQL QCYSGATILG DGRVALIVDV GGIAQLGGLA VERAHETTSE SVGEAESEAE PVIVLAAGGT ERLGVRLREI ERLEEFALGA VEYVEGHEVV QYRGGVMRLV RLAHLVGLAS QPARPDPINV IVAVDPAGQL VGLVVDEVLD MALAPVSRTH GAIVLDGKLV RVLELDALLE RAGEVSHV
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