Gene Afer_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0200 
Symbol 
ID8322253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp205042 
End bp205770 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID644951347 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003108842 
Protein GI256371018 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0955644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTG ACGACAAGCG CGCCCACGTC GGCACGGTGC TGATCGCCGA CGACGAACCG 
AGCTTCGTCG AGGCCCTCGT CCTCGGCCTG ACGCGCGAAG GCTTCGAGAC GATCGTGGCC
AACGACGGCG AAGAGGCGCT GGCGTTGAGT CGCTCGCACC ATCCCGACCT CATCCTGCTC
GATGTGATGC TGCCGCGCCT GTCAGGGCTC GACGTCTGTC GCACCATTCG ACAGGAGTCC
TCGGTCCCGA TCATCATGGT GACGGCACGT TCCGGTGAGC TCGACACCGT GCTCGGCCTC
GAACTCGGCG CCGACGACTA CGTCACCAAG CCGTTTCGCA TGAGCGAGCT GGTCGCCAGG
ATCCGTGCGC AGATGCGCCG CACCAAGCAC CAGGGCCAAG CCCAGGCCGC AGAGGAGATC
CTCGAGAGCC ACGGCATCAC CGTGTACGTC GATCGCCACC AAGTCGATGT CCGAGGGACC
GAGGTCCGCC TGCCTCCGAA GGAGTTCGAT CTCCTCTTGC TGTTCCTGCG CAACCCCGGC
CGCGTGCTCA CGCGCGATCT GATCCTCGAC CGAGTCTGGG GGTCGGACTA CTACGGCGAC
ACGAAGACGC TCGACGTGCA CGTCAAGCGC CTTCGCTCCA AGATCGAGCC AGATCCCAAC
AACCCGAGCA TCATCGCCAC GGTACGAGGG GTCGGCTACC GGCTCGAACG AGACCACGCC
CGTGCCTGA
 
Protein sequence
MAADDKRAHV GTVLIADDEP SFVEALVLGL TREGFETIVA NDGEEALALS RSHHPDLILL 
DVMLPRLSGL DVCRTIRQES SVPIIMVTAR SGELDTVLGL ELGADDYVTK PFRMSELVAR
IRAQMRRTKH QGQAQAAEEI LESHGITVYV DRHQVDVRGT EVRLPPKEFD LLLLFLRNPG
RVLTRDLILD RVWGSDYYGD TKTLDVHVKR LRSKIEPDPN NPSIIATVRG VGYRLERDHA
RA