| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0181 |
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| Symbol | |
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| ID | 8322234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 188457 |
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| End bp | 189623 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644951328 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_003108823 |
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| Protein GI | 256370999 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.610235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGC GTGAGCTGAC CCTCTACCGA CGTCTTGCCG AGCTCTTGGT TGCGCCACTC
GAGGTCGGCG AGGTGGCGAG CCGCACCGCT GCGCTCGTCG TCGAGGCGGT CGATGCGAGC
GTGTGCTTCG TGCACGCCGT CGATCACGAG CGCGGGCGCC TCACCCTGAT CGGGGCCACC
CCGCCCTTCG ATCGAGTCGT GGGTCGCATC CAGCTCGGCC TCGGTGACGG GATCGCAGGA
TGGGTCGCTC AAACCGGTCG TGCCGCCGTG GTGCCCGACA AGTGGGCGGA CCACCGGTAT
CGCTATATAC CCGAGCTCGG TGGGGAGCAC TTCACCTCGC TGGTGTCGGT GCCACTCGCT
CGCGACGGAA GGCCGACCGT CGGGGTGCTG AACGTGCACT GGCGCGAGGC GATCGCTGAC
CTGGAGCACG AGGCTTCCGT GATCGAGGCG GCGGGTCGAT TCCTCGTCGG GGCGCTCGAG
CACGCGCTGC TCGCAGACCA GCTCGTCACC GGTGAGGCCG CGCTCGAGCG TTTCGCGACG
GAACTCATCC GTGCCCAGGA GGCCGAGCGC CGTCGCGTCC AGCTCGACCT CCACGACGGC
GTCGCCCAGT CGCTGCACGC CGCGGCGTAC CGTCTCGAGG GGCTTCGAGC CAGCGCACCG
CCGGCGCTCG CGTCGGAGCT CACGGTGGTG AGGGACCTGG TTCGCGCGGC GAACGCCGAG
GTGTCACGGC TCGTGCGCGA CCCGGGACGT CAGGTGCTCG AGGACTTCGG GCTCGCCGAG
GCGCTCCAGT CCGTCGCACA CGGCTATCCC GACCTCGAGG TCCAAGTCGA CGTCGAGCTC
GACGATCTGA CGCTGCTGCT CGAGCCCGAG CGGGGGCTCG CCGTCATGCG CATCTGCCAG
GAGGCACTCA ACAACGTCGC GAGTCACGCC GCGACCGACG CTGCCGAACT GCGCGCTCGA
CGCGTCGGCG ACGACTTGGT CGTGACCGTA CGCGATCGTG GCGTGGGTTT CGAGCCCGAG
GCAACCGTGC CCGGTCGTCT CGGGCTCGTC GGGATGCGCG AGCGCGCGCG CCTGCTGGGC
GGAACCATCG AGATCTTCTC TCGCCTGGGT GAAGGAACGC TGGTCCGTCT GCGTGTGCCG
ATCGTGCCGT CGGTCGCGTC GTCCTAG
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| Protein sequence | MSARELTLYR RLAELLVAPL EVGEVASRTA ALVVEAVDAS VCFVHAVDHE RGRLTLIGAT
PPFDRVVGRI QLGLGDGIAG WVAQTGRAAV VPDKWADHRY RYIPELGGEH FTSLVSVPLA
RDGRPTVGVL NVHWREAIAD LEHEASVIEA AGRFLVGALE HALLADQLVT GEAALERFAT
ELIRAQEAER RRVQLDLHDG VAQSLHAAAY RLEGLRASAP PALASELTVV RDLVRAANAE
VSRLVRDPGR QVLEDFGLAE ALQSVAHGYP DLEVQVDVEL DDLTLLLEPE RGLAVMRICQ
EALNNVASHA ATDAAELRAR RVGDDLVVTV RDRGVGFEPE ATVPGRLGLV GMRERARLLG
GTIEIFSRLG EGTLVRLRVP IVPSVASS
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