| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0173 |
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| Symbol | |
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| ID | 8322226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 182612 |
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| End bp | 183541 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951320 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003108815 |
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| Protein GI | 256370991 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.383419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACGC CCGTGACGAG CGCGCCGGCA CCGGCTGGGG CAGAGGCTGC GGCTCCGGTG
CAGTCGGGGT CGAGGGCGCG AGCTTCTCTC GCGCGGATCG TCGGGGCGCT CTGGTCGAAC
GTGCGAGCTC GGATCGGCAT CGTCATCCTC CTCGCCTTCG TGCTCATGGC GCTCGCCGCA
CCGCTGATCG CGCCCTACTC CCCGACGGCG ACGTCGTTTG CCGACTCCCT GCCCCCGAGC
GCTGCGCATC TGCTCGGCAC CACCTCGAGC GGCCAGGACG CCCTCTCGCA GCTGCTCTAC
GGAGCGCGTA CCTCGGTGCT CGTGGCCTTC GCCGCCGGCG GCATCTCCAC CGTCGTCGCC
ATCGTGGTCG GACTGATCGC TGGGTTCTCG CGCGGGATCG TGGACGAGAC CCTGAGCTTC
GTGATGAACG TGATGCTCGT CATCCCCGGG CTTCCGCTCA TGATCGTCAT CACCGCCTAC
CTGCCGGGTC GAGGTCCCGG TGTGATCATC GCGGTCATCG CCCTCACCGG GTGGGCGTGG
GGAGCGCGCG TGCTCCGAAG TCAGGCGAAG TCGGTGAGCG CCCGTGACTT CGTGCTCGCT
GCACGCCTGG CCGGAGATTC GTCCTGGCGC ATCGTGTTCC GCGAGATCCT CCCCAACATG
ACGTCGCTCA TCGCGGCGAG CTTCTTCGGC GCGGCGACCG CCGCGGTGCT CGCCGAGGCC
GGACTCGAGT TCCTCGGGCT CGGCAATCCG AACGCCGTGA GTTGGGGGAC GATGCTCTAC
TGGGCGGAGA ACTCCAATGC GTTGCTGACG GGCCAGTGGG GCGTCATCGT CGGTCCGGGT
CTGTGCATCG CACTCCTGGC CTCCTCGCTG TCGCTCATCA ACTTCGGTGT CGATGCGCTC
TCGAATCCCC GGCTGAGGGA GCGCGCATGA
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| Protein sequence | MSTPVTSAPA PAGAEAAAPV QSGSRARASL ARIVGALWSN VRARIGIVIL LAFVLMALAA
PLIAPYSPTA TSFADSLPPS AAHLLGTTSS GQDALSQLLY GARTSVLVAF AAGGISTVVA
IVVGLIAGFS RGIVDETLSF VMNVMLVIPG LPLMIVITAY LPGRGPGVII AVIALTGWAW
GARVLRSQAK SVSARDFVLA ARLAGDSSWR IVFREILPNM TSLIAASFFG AATAAVLAEA
GLEFLGLGNP NAVSWGTMLY WAENSNALLT GQWGVIVGPG LCIALLASSL SLINFGVDAL
SNPRLRERA
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