Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0154 |
Symbol | |
ID | 8322207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 160825 |
End bp | 161703 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951301 |
Product | Integrase catalytic region |
Protein accession | YP_003108796 |
Protein GI | 256370972 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGCT ACCACTGGAT CTCCCGCCAG GAGGCCAAGG GCTTCTCTGT AGCGGCAGCA GCACGAGTCA TCGGGGTCTC TCGCCAGGCC TACTACGCCT GGCGACACCG TCGGGACCGA GGCGAGGATC CCGAGCACCT GGTGCTCGCG AGCGAGCTTC GCGCCATCTG GCACGAGAGC GACGGCACCT ACGGCAGCCC CCGCATCACC CACGAGCTGC GACGGCGCGG GTTCTGCGTG AACCACAAGC GGGTGGAACG CCTGATGCGC GAGCTCGAGA TGGCAGCGGG CCCACGCCGG CGCTTCGTAG TCACGACGAG GCGGGGAGAG GACGCAGCGC TCCCGGACCT CGTCCGTCAG GACTTCGCTC CTGGTGAGCC GAAGCGCAGG TATGTGAGCG ACATCACCTA CGTCCGCACC GATGAGGGGT TCTGCTATCT CGCCACGGTG GCAGATCTTG GCTCGAGGCG CATCGTGGGC TGGTCACTTG GGCGTCACAT GCCCGATGAC CTGGTGGTCG AGGCGATCCG CGAAGCACTC GGGACTCGGG GCAGCCTGGC TGGGGCGATC TTTCACAGCG ATCGCGGCAG CCAGTACCTC TCCCGGAAGG TACGGAGCCT GCTCGCGACC CTTGGCATTC GCCAGTCGGT GGGGAGGGTC GCGACCTGCT ACGACAACGC CGTGGCCGAG TCCTTCTTCG GGAGCTTGAA GCGCGAGCTG GTGGCTCGCT ACCGCTTCGC GAACCTCTCA GGGGCTCGCT CTGCCATCGC TAGCTGGATT CACCGTTACA ACACGGTCCG CCTGCACTCA AGCCTCGGGT ACCTACCGCC CGTCGAGTAC GAGCTCTCCT GGGCCTGCCG GGAGGTGGCC GTGGCCTAA
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Protein sequence | MSRYHWISRQ EAKGFSVAAA ARVIGVSRQA YYAWRHRRDR GEDPEHLVLA SELRAIWHES DGTYGSPRIT HELRRRGFCV NHKRVERLMR ELEMAAGPRR RFVVTTRRGE DAALPDLVRQ DFAPGEPKRR YVSDITYVRT DEGFCYLATV ADLGSRRIVG WSLGRHMPDD LVVEAIREAL GTRGSLAGAI FHSDRGSQYL SRKVRSLLAT LGIRQSVGRV ATCYDNAVAE SFFGSLKREL VARYRFANLS GARSAIASWI HRYNTVRLHS SLGYLPPVEY ELSWACREVA VA
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