| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0142 |
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| Symbol | |
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| ID | 8322195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 152026 |
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| End bp | 153138 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644951289 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003108784 |
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| Protein GI | 256370960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGG CGATCCAGAG TGCGGCTCCG CCCGCCGTGG CCGCCATCGA GCAGCTCGCC
AGCACCCTGT CAGCGGCCGC GAGCGCGCAG GGCGTCGCCT CGTTCGAGTC GACGCTCGCC
GCAGCGCTCC AAGCCGAGGG CCAGGTGATC TCGGGGACCG GGAAGAGCCA GAGCCCAGGA
TCGGTGACGG GGGTGGCCCA GCAGCCGAGC GCGAGCGTCG TGCCGACGTC GAACGCACCG
GTCGACCCGT TCGCTGGTCT CACCCCGGTG CCCCCGACGC CAACGGCCCA GACCCTCGTC
TCGACGGGGG GCTCGGCCTC CGAGCGTGCG ACGGCGCTCG CGGCCGCGAC CGGTGAGATC
GGCGTACCGT ACGTGTGGGG CGGATCGTCG CCGGCGACGG GGTTCGACTG CTCGGGCCTC
GTCCAGTGGG CGTACGCTCA GGCAGGAGTC GAGCTCCCTC GTACGGCTGC CGAGCAGCAG
ACCGTGGGGA CGCTCGTTCC CTCGCTCGCC GCGGCCCAGC CTGGAGACTT GGTCTTCTAT
GGGAACCCGG CCTATCACGT CGCGATCTAT GCCGGGAACG GCATGGTGGT GCAGGCACCG
ATGACCGGTG AGAACGTCGA GCTCGCCCCG GTCGGTACGC CGACGGAGAT TCGTGACCCG
ACGGCCGTCG CACCGCAGCC GACGGTGAGT AGTGCCGTCG CGACGCCGAG CGACCTCACG
GCGACGTTCC AGGCTGCGAG TGCGGCCTAT GGCCTGCCCA CAGGGATGCT CGAGGCGGTT
GCCGAGACCG AGTCCAACTT CAACCCGAAC GCCGTGTCGT CTGCAGGCGC GGAGGGGATC
ATGCAGCTCA TGCCCCAGAC GGCGGCCTCG CTCGGGGTCA ACCCCTTCGA CCCCACCCAG
GCCATCTGGG GCGCTGCCAA GCTGCTCGCG GGCAAGCTCG CCCACTTCGG TTCCGTGCCG
CTCGCGCTGG CTGCCTACAA CGCGGGAGAC GGCGCGGTGG AGGCCTACGG CGGTATTCCG
CCCTACGCAC AGACGCAGAA CTACGTCCGC ACGGTGCTCT CGCTGATGGG AGGTGAGGCC
GATGGCTCCG GTCAGAGCAC TGCCAGCGCG TGA
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| Protein sequence | MTMAIQSAAP PAVAAIEQLA STLSAAASAQ GVASFESTLA AALQAEGQVI SGTGKSQSPG
SVTGVAQQPS ASVVPTSNAP VDPFAGLTPV PPTPTAQTLV STGGSASERA TALAAATGEI
GVPYVWGGSS PATGFDCSGL VQWAYAQAGV ELPRTAAEQQ TVGTLVPSLA AAQPGDLVFY
GNPAYHVAIY AGNGMVVQAP MTGENVELAP VGTPTEIRDP TAVAPQPTVS SAVATPSDLT
ATFQAASAAY GLPTGMLEAV AETESNFNPN AVSSAGAEGI MQLMPQTAAS LGVNPFDPTQ
AIWGAAKLLA GKLAHFGSVP LALAAYNAGD GAVEAYGGIP PYAQTQNYVR TVLSLMGGEA
DGSGQSTASA
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