| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0109 |
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| Symbol | |
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| ID | 8322162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 118617 |
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| End bp | 119465 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951258 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_003108753 |
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| Protein GI | 256370929 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCGC CGCTTACCTC CCGCCTCGAG GCGGGAGCAC GCGCGGCGCG TTGTGGTCGC
GCCAGTCCCG AGGCCTTGGC GACTAGCCTT GCCGAGGTGC CAAGCGCCAA GCGAGCCCGT
ATTCGGGCCA ACCAAGAGCG ACTGCGCGCC GAGCGCGCAG CCCGTCAGCG TCGCACCCGC
CTCATCCGAC GAGGAGTCAT CGTCCTCGTC ATCCTCGTCG CCCTCCTCGC GCTGATCTAC
GAGCTCACGC GCCCGACCGC AAAGCCCGCC AAGGGCCTCC TCGCCAACGG CTGTCCCAAC
CCGAACGGGT CCGCACCCAA GCGAACGCAC TTTGGCGCCT ACCCCAAGGA GTGCCTCGTC
GCAGGGGATA CCTACACCGC CACCGTCGAC ACGACCGCCG GCACGTTCAC CTTCCGACTC
GAGCCGAACC TGGGCCCCAA GAGCGCCAAC GCCTTCTACG TCCTCAGCCT GTATCACTTC
TACGACGGGA CGACCTTCTT CCGAGTGATT CCGGGCTTCG TCATCCAAGG TGGCAGCCCG
ACGAACACCG ACACCGGATC ACCGGGCTTC GCCTACGCCG ACAAGAACCC TCCTGCCGGC
TCGTACCGCT TCGGCACGCT CGCCATGGCG AACTCCGGGG CGCCAGGGAC GAACGGCTCG
CAGTTCTTCA TCGTGTCGGG TCCCGCAGGC GAGCAGCTCC CCCCTGACTA CTCGGTCTTC
GGCCAGGTGA CGAGCGGCCT CAACGTCATC ACCACCATCA ACGACGCCGG CTCGGCCCAG
AACAACGGCA TCCCCCCGAA GCACACCTAC CGGATCGTGT CGATCCACTG GCACATCGCG
AGCTCGTAG
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| Protein sequence | MRAPLTSRLE AGARAARCGR ASPEALATSL AEVPSAKRAR IRANQERLRA ERAARQRRTR
LIRRGVIVLV ILVALLALIY ELTRPTAKPA KGLLANGCPN PNGSAPKRTH FGAYPKECLV
AGDTYTATVD TTAGTFTFRL EPNLGPKSAN AFYVLSLYHF YDGTTFFRVI PGFVIQGGSP
TNTDTGSPGF AYADKNPPAG SYRFGTLAMA NSGAPGTNGS QFFIVSGPAG EQLPPDYSVF
GQVTSGLNVI TTINDAGSAQ NNGIPPKHTY RIVSIHWHIA SS
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