Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0100 |
Symbol | |
ID | 8322151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 105406 |
End bp | 106413 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644951248 |
Product | Alpha/beta hydrolase fold-3 domain protein |
Protein accession | YP_003108744 |
Protein GI | 256370920 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.405818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACTTG ACCCGACGAT CGCGAGCTTG CTCGAACAGC TCGCCGCAAC CGGAGCGACG ACTCCGGTGT ACGAGCTGTC GCTGGCCGAT GCGAGGGCTG GCCTCGATCT CGTCGGCACC ATCGGGATCG CAAATCCTCC TGCGGTTGCC CGAGTCGAGC AGCGGACCAT CGACGCTGGC GACCACGCCA TCGCGGCGGA GCTGGTTTGG GGCTCTGAGG CGCCACGGGC TGCCCTGCTC TTCGTGCACG GCGGTGGGTT CGTCCTCGGG AGTCTGCGTG GCTACGGGCC GATGGTCCGC CATCTCGCGG CCTCGACCGG CGCGTTGGTC GTGTCCCTCG ACTACCGGCT CGCCCCGGAG CACCGTTTCC CGGCAGCGGT CGACGACACG CTCCATGGTT TGCGGTGGCT CGCGGCCGAG CGAGATGCGC TCGGCGTCTC GGTGCTCGGT GTCGTGGGGG ACTCGGCAGG CGGCAACCTC GCGGCCGTGG CGAGCATCGC CGCGCCGTCC GAGGGGATCG ACCTCGCGCT CGCCCTCGAG CTCTATCCCG CGACCGATCT CAGCGAGGAC CTCGCCTCGC TCGAGCGCTT CGGCGAGGGT TACTACCTCA CCGCCGAGGA GGCTCGGTGG TTCGCGTCCC AGTATCTCGG CGATGACGAA CGGCTGCTCG CAGATTGGCG TGCCAATCCC ATGGCCGCCA CCGACCTCGA CGACCTGCCA CTCACGATCG TCGCGACCGC TGGCTACGAC CCCATCGGTG ACGCGGGCCG CCGATGGGCA GCTCGTCTCG CAGCGCTCGA GCCGCGCGGT AGCGTGCCCG ACGACCTGGA CGAGCGTCTG CGACAGGCGG GGGTCGAGGT CTCGGGCTGG GCCCGCGGTC GGGTCATCTC GCTGGACTTT CCCACGCTCG TCCACGGTTT CGCATCGATA GCCCAGCTCG CACCGGCGGC GGGGGCCGCG TGCGAGCTGA GCTATGGCCT GGCCGCCTGG GTGCTCGAAC GGGCGTGA
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Protein sequence | MALDPTIASL LEQLAATGAT TPVYELSLAD ARAGLDLVGT IGIANPPAVA RVEQRTIDAG DHAIAAELVW GSEAPRAALL FVHGGGFVLG SLRGYGPMVR HLAASTGALV VSLDYRLAPE HRFPAAVDDT LHGLRWLAAE RDALGVSVLG VVGDSAGGNL AAVASIAAPS EGIDLALALE LYPATDLSED LASLERFGEG YYLTAEEARW FASQYLGDDE RLLADWRANP MAATDLDDLP LTIVATAGYD PIGDAGRRWA ARLAALEPRG SVPDDLDERL RQAGVEVSGW ARGRVISLDF PTLVHGFASI AQLAPAAGAA CELSYGLAAW VLERA
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