Gene Afer_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0087 
Symbol 
ID8322135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp89146 
End bp91083 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content68% 
IMG OID644951232 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003108731 
Protein GI256370907 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAG AGGTCCAGCT CCAAGTCTTC GGGACGCGCT ACCAGCCCAT CGCGAAGATC 
GCCCGAGGGG GCATGGCCGA CGTCTACGAA GCGCGAGACC TCCTGCTCGA CCGCCTCGTG
GCGCTGAAGG TGCTCTTCGC GGAGCTGTCG ACGAACCCGA CGTTCGTCGA GCGATTCCGG
CGTGAGGCGC AGTCGGCAGC GGCGCTGTCG CACCCGAACA TCGTGTCGGT CTACGACTGG
GGCCCCGCGA ACGGCACCTA CTTCATCGCG ATGGAGCTCG TGAGCGGTCA GACGCTGGCG
CAGCTCATCC GCACGGTCGG GGTGGTCCCC CCCGATCAAG CAGCCTCGAT CGGCGCCGAC
GTCGCGCTCG CACTCGCCTT CGCCCATCGC CACGGGGTCG TCCACCGCGA CATCAAGCCC
TCCAACGTGC TCATCACCGA GGACGGCATC GTGAAGGTGG CCGACTTCGG CATCGCACGT
GCGGTCGCCA ACGACGAGGA CCTGACCCAG ACCGGCTCGG TCCTCGGGAC CGCGACCTAC
ATCTCGCCGG AGCAGGCCCG TGGCGAGGAT CTCGATGGAC GCAGCGACAT CTACTCCCTC
GGGATCGTCC TCTACGAGAT GCTCACCGGG ACGCCACCCT TCCTCGGTGA GACACCGATC
GCCGTCGCCT ACAAGCACGT CACCGAGGCG CCCACCCCGC TCCGGAACGT GAACCCTCGG
GTGAGTGCCG AACTCGAGAC CGTGGTCATG CGCTGCCTCG CCAAGCAGCG CGACCAGCGC
TACCCCGACG CGACGGCACT GCGTGTCGAT CTGCAGCGGG TGCTCGAGCA CCGTCCCCTG
CGCACGACGA CCACCCAGAC CGCGCTCGGC GAGCGCACGA TGGCGATCGG AGCGGTCGAG
GGCGTTGGCG ATCGGACCCA GTTGCTCAGT CGTGTCGAGG ACACGGCATC GATCCCGGCG
GTGACGCCGC CGGTCGAGAC AGCTCGTCGG CGGCGGCGCT GGCCATGGAT CCTACTCGTC
ATCGTGGTGC TGCTCGCACT CGCAGGAGGC CTTCTGTACG CGAAGCTCGC CGGCTCGAAC
CATCACGTCG CAGCGCCGCT CCCTCGCGTC GCCGTCCCGA ACGTCGTCGG CTCCCAGGAG
CAGGGCGCAG CGCAGGTCCT CTCCAACCTT GGCCTCCAAA GTGCACTGTC GTTCCGGGCG
GCCTCGGCCT CCTCGGGTAC CGTCATCGCC GAATCGCCAC GGGCTGGCAC CAAGGTTCAG
AAGGGCTCCA CCGTCGATCT CGTGGTCTCG AGCGGACCGG CGGCGGTGAC GGTACCGAAG
GTCGTCGGTG AGACCGCATC GACAGCCGAG GCGAAGCTGC TCGCGTTGGG CTTCAACGTC
TCCACCAACT ATCAGGCAGC GAGCGCGCCG CAGGGCACCG TGGTCGCCGA GTCGCCGACT
GGCGGGACGT CCGCCCCGCA CGGTTCGACC GTCGTCCTCA CCGTCTCCAA CGGTCCGAGC
TCGATCGCGG TGCCGAACGT CGTCGGTCTC TCGCTCGCAT CGGCGTCCAA CAAGCTCGGG
GCCGACCAAT TGGCTGTTGG TACGGTGACG TACCAGGCAA GCTCGAGCGT GCCGAATGGT
GACGTCATCT CGACGAGCCC CGCTCCGGGG ACGAAGGTGG CGCCGGGATC GAGTGTTGCG
TTGGTGGTGT CGCAGGGCAA CGAGGCGACG GTACCGAACG TCGTCGGCGA TCCGGTCGCC
ACCGCAGAGC AAGACCTGAC CAACGCTGGC TTCACCTACA CACTCTCGCA GCCGAACCCT
CCGGCTGCCG CGGTGGTCGA GTCGACGTCG CCGGCCGCAG GGACCCAGGC ACCGGTTGGG
TCCAGCGTGA CCATCACGTG GACGACGACC GCTTCGGGCG GTCCTGCCAG CGGGGGGCCA
ACCCCGTCAG CCGGCTGA
 
Protein sequence
MTEEVQLQVF GTRYQPIAKI ARGGMADVYE ARDLLLDRLV ALKVLFAELS TNPTFVERFR 
REAQSAAALS HPNIVSVYDW GPANGTYFIA MELVSGQTLA QLIRTVGVVP PDQAASIGAD
VALALAFAHR HGVVHRDIKP SNVLITEDGI VKVADFGIAR AVANDEDLTQ TGSVLGTATY
ISPEQARGED LDGRSDIYSL GIVLYEMLTG TPPFLGETPI AVAYKHVTEA PTPLRNVNPR
VSAELETVVM RCLAKQRDQR YPDATALRVD LQRVLEHRPL RTTTTQTALG ERTMAIGAVE
GVGDRTQLLS RVEDTASIPA VTPPVETARR RRRWPWILLV IVVLLALAGG LLYAKLAGSN
HHVAAPLPRV AVPNVVGSQE QGAAQVLSNL GLQSALSFRA ASASSGTVIA ESPRAGTKVQ
KGSTVDLVVS SGPAAVTVPK VVGETASTAE AKLLALGFNV STNYQAASAP QGTVVAESPT
GGTSAPHGST VVLTVSNGPS SIAVPNVVGL SLASASNKLG ADQLAVGTVT YQASSSVPNG
DVISTSPAPG TKVAPGSSVA LVVSQGNEAT VPNVVGDPVA TAEQDLTNAG FTYTLSQPNP
PAAAVVESTS PAAGTQAPVG SSVTITWTTT ASGGPASGGP TPSAG