Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0076 |
Symbol | |
ID | 8322124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 75804 |
End bp | 77180 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644951221 |
Product | Pyridoxal-dependent decarboxylase |
Protein accession | YP_003108720 |
Protein GI | 256370896 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACCGAC TCGATGATGA ACTCCGGTCG CTCCAAGCGT CGATCGTTCG CTACGCCATG GAACGCATTG CTCTCCAGCC ACCACCGCTC GACGGGCCGA AGAGCGCCGA CGAACTGCGC GCGCTCTACG GCGCGAACGT CACCGAGGAC GGTATCGGCG GCGAAGAGGC CTTGCGCCGC TTCGTCGAGG GCTACGCGCC GGCCACCCTC AGCTCGGATC ACCCTCGGTT CTTGGCGTTC GTCCCGGTCG CTCCGACCAA GGCAGCGGTG CTCTTCGACA TGATCGTCTC GGCCTCGAGC ATCTCCGGGA CCTCGTGGCT CGAGGGCGCT GGCGCGGTGT ACCTCGAGAA CGAGGCGCTG CGCTGGCTCG CCGACCTCAT CGGGTTCCCC GAGACGGCTG GTGGGACGTT CCTGTCGGGA GGTTCGCTCG CGAACCTTTC CGGTCTTCAC GCAGCGCGTC AGGCGGCCAA GGAGCGCCTC GGCGGTGTGC GGCCCGATCG CTACCGCATT CTTGCCTCGA CCGAGGCGCA CTCGTCGATT CGCACGGCAG CTGACGTCAT GGATCTCGAG GTCGTCGAGG TCGAGGTCAA CGATCCGGGA CGGTTGCGCG GTGAGGACCT CGTACGGACG TGGGCAAAGC TGACCGATGC CGAGCGCAAC TCGGTGGTCG CTGTCGTGGC AACGGCCGGC ACGACGAACG CGGGCCTCGT CGATGCACTT GACGAGGTCG CCGACTTTGC CGAGGTCAAC GGGCTCTGGA TGCACGTCGA CGCTGCCTAC GGTGGTGCTG CGCTCGCGTC CCATCTTCGC GAGCGCTTTC GTGGCATCGA ACGTGCAGGC TCCGTCGTGA TCGACCCGCA CAAGTGGCTG TTCGCTCCGT TCGATGCTGC GGCCATCGTC TACCGTGACC CGAACGTTGC TCGGCGGGCC CTGACGCAAG AGGCCGCCTA CCTCGACGAG ATCAATCGTG CGCCCGACTG GAACCCGTCG AGCTACGGCT ATCACCTCTC GCGGCGAGTT CGAGGTCTGC CATTCTGGTT CTCGCTCGCG ACGCACGGCA CGCGCCGTTA TCGCGAGGCC ATCGAAGCGT CGATCACGCT TGCCCACGAG AGCGCCCACG AGATCGAGCG ACGTCCCTAC CTCGAGCTCG CGATCGAGCC CGAACTGAGC GTCGTGGTGT TTCGACGCCT GGGATGGGAT GCCGAAGCGT ACGAGCGATG GTCGCGGCAG GCGCTGGTCG ACGGGGTGGG CTTCGTCCTC CCCACGGCCT ATCGAGGGGA GAAGCTGTTG CGCTTCTGCT TCGTCAATCC ACTGACCACC CTCGACGACG TACGGGCCAT CCTCGACACG CTCGCGATCG ACCCTCGGCC CTGGTGA
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Protein sequence | MHRLDDELRS LQASIVRYAM ERIALQPPPL DGPKSADELR ALYGANVTED GIGGEEALRR FVEGYAPATL SSDHPRFLAF VPVAPTKAAV LFDMIVSASS ISGTSWLEGA GAVYLENEAL RWLADLIGFP ETAGGTFLSG GSLANLSGLH AARQAAKERL GGVRPDRYRI LASTEAHSSI RTAADVMDLE VVEVEVNDPG RLRGEDLVRT WAKLTDAERN SVVAVVATAG TTNAGLVDAL DEVADFAEVN GLWMHVDAAY GGAALASHLR ERFRGIERAG SVVIDPHKWL FAPFDAAAIV YRDPNVARRA LTQEAAYLDE INRAPDWNPS SYGYHLSRRV RGLPFWFSLA THGTRRYREA IEASITLAHE SAHEIERRPY LELAIEPELS VVVFRRLGWD AEAYERWSRQ ALVDGVGFVL PTAYRGEKLL RFCFVNPLTT LDDVRAILDT LAIDPRPW
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