| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_4160 |
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| Symbol | ligB |
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| ID | 3887980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | - |
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| Start bp | 4784950 |
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| End bp | 4786491 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 637865718 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_467361 |
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| Protein GI | 86160576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.145262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTCG CCGAGCTCGC CGAGGTCTCC CGCGCGGTGG CCGCCACCCC GGCGCGCCTG
GAGAAGATCG CGCGCCTCGC CGACGCGCTC GGCCGGCTCG CGCCGGACGA GCGCGCGGTG
GGCGCGAGCT GGCTCGCCGG CGACCTGCCC GGTGGGCGCG TCGGCATCGG CGCGGCCACG
CTGCGGGCGG CGCTCGAGGC GGCGCCGCCG GAGCGCAGCG GGCCGGGGCT CACGGTGGCG
GAGGTGGACG CCGCCCTCCG CCGCATCGCG GCCGTGGCCG GCCCGGGCTC CGGCGCCGCG
CGCCGCCGGG AGCTGGACGC GCTCCTCGCC CGCGCCGGCA ACCCCGAGCG CCGGTTCCTC
GCGGCGCTCG TCCTCGGCGA GCTGCGCCAG GGCGCGCTGG AGGGCGTCCT CGCCGATGCG
GTGGCGAAGG CGGCGGGGCT CCCCGCGGCG GAGGTCCGGC GCGCGGCCAT GCTCGCGGGC
GCGCTCCCGC CCGTCGCGGA GGCGGCGCTC TCCGAGGGCG CCGCCGGGCT GGCGCGCTTC
CGGCTGCGGG TGGGGGAGCC GGTGTCGCCC ATGCTGGCCC AGACCGCGGC GGACGTGGAC
GAGGCGCTCC GGGCGCTCGG CGGCGAGGCC GCGCTGGAGT GGAAGCTCGA CGGCGCGCGG
ATCCAGGCGC ACCGCGACGG CGAGGCGGTG CGGGTGTTCT CGCGCTCGCT GCGCGACGTG
ACCGCGGCGG TGCCGGAGGT GGTGGCGCTC CTGCGCGCCG CGCCCGAGCC GCGGCTCGTG
CTCGACGGCG AGGCCATCGC GCTCCGCGCC GACGGCACGC CCGAGCCGTT CCAGGTCACC
ATGCGCCGCT TCGGCCGGAA GCTGGACGTG GAGCGGCTCG CGCCCGAGCT GCCGCTGACC
GCGTTCTTCT TCGACGCGCT GGTGGCCGGC GGCGCGGAGC TGCTGGCGCG CCCCGAGCGC
GAGCGCTGGG CCGCGCTCGC GCGGGCCATC CCGGCGGAGC GCCGCGTCCC GCGGCTCGTC
ACCCGCGATC CCGCCGAGGC CCGCGCGTTC CTCGAGGACG CGCTCGCCCG CGGCCAGGAA
GGCGTGGTGG CGAAGGCGCT CGACGCACCC TACGAGGCCG GCCGCCGCGG CGCCGCGTGG
CTCAAGGTGA AGCGCGCGCA CACGCTCGAC CTCGTGGTGC TCGCCGCGGA GTGGGGGAGC
GGCCGGCGCC GCGGCTGGCT CTCGAACCTG CACCTCGGCG CGCGCGACCC CGCCTCCGGC
GGCTTCGTGA TGCTCGGGAA GACGTTCAAG GGCATGACCG ACGCCATGCT CGCGTGGCAG
ACCGACCGGC TGAAGGCGCT CGCCACCGGG CCGCTCGACG CCTGGCAGGT CCCGGTGCGC
CCGGAGCTGG TCGTGGAGGT CGCGTTCGAC GGGATCCAGT CCAGCCCCCG GTACCCCGGC
GGCCTCGCCC TCCGCTTCGC GCGCGTGAAG CGCTACCGCG AGGACAAGCG CCCCGAGGAC
GCGGACACGA TCGAGACGGT GCGGGGGCTG TACGGAGGGT GA
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| Protein sequence | MLLAELAEVS RAVAATPARL EKIARLADAL GRLAPDERAV GASWLAGDLP GGRVGIGAAT
LRAALEAAPP ERSGPGLTVA EVDAALRRIA AVAGPGSGAA RRRELDALLA RAGNPERRFL
AALVLGELRQ GALEGVLADA VAKAAGLPAA EVRRAAMLAG ALPPVAEAAL SEGAAGLARF
RLRVGEPVSP MLAQTAADVD EALRALGGEA ALEWKLDGAR IQAHRDGEAV RVFSRSLRDV
TAAVPEVVAL LRAAPEPRLV LDGEAIALRA DGTPEPFQVT MRRFGRKLDV ERLAPELPLT
AFFFDALVAG GAELLARPER ERWAALARAI PAERRVPRLV TRDPAEARAF LEDALARGQE
GVVAKALDAP YEAGRRGAAW LKVKRAHTLD LVVLAAEWGS GRRRGWLSNL HLGARDPASG
GFVMLGKTFK GMTDAMLAWQ TDRLKALATG PLDAWQVPVR PELVVEVAFD GIQSSPRYPG
GLALRFARVK RYREDKRPED ADTIETVRGL YGG
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