Gene Adeh_3939 details

Gene Information

• Locus tag: Adeh_3939
• ID: 3887751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: -
• Start bp: 4548245
• End bp: 4548955
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637865497
• Product: ABC transporter, ATPase subunit
• Protein accession: YP_467140
• Protein GI: 86160355
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.920707
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATCG TCGCGGTGCA GGGCGTCTCG AAGGACTACA TGCTCGGCAA GACGGTGGTG 
CCGGCGCTTC GGGACGTGAC GCTGGAGATC GGGCGGGGCG AGTTCCTCTC CATCGCGGGG 
CCGTCGGGCA GCGGGAAGAC CACCCTGCTC AACCTCATCG GCTGCGTGGA CACGCCCACC 
ACCGGCGTCG TGCAGGTGGA CGGCAAGGAC ACCTCGCGCC TCAGCGAGCG GCAGCTCACC 
GACCTGCGCC TGCGCACCAT CGGCTTCATC TTCCAGAGCT TCAACCTGGT CCAGGTGCTC 
TCGGTGTTCC AGAACGTGGA GTTCCCGCTG CTCCTCCAGG GCGGGCTCTC GCGGCGGGAC 
CGCGAGGGGC GGGTGATGGG GCTGCTCGAG GCGGTGGGCA TCGCCAGCCA CGCCCGCCAC 
CGTCCCAGCG AGCTCTCCGG CGGCCAGCGC CAGCGCGTCG CGGTGGCCCG CGCGCTCGTG 
ACCGCGCCGT CGCTCGTGCT CGCGGACGAG CCGACCGCGA ACCTCGACTC GGCCACCGGC 
GAGAACATCA TCGACCTCAT GAAGGAGATG AACGCGCGCG ACGGCACGAC GTTCGTGTTC 
TCCACCCACG ACCCCAAGGT GATGGCGCAC GCGAGCGCGG TGATCCGCAT CGCCGACGGG 
CGGATCGTGG GCCGCGAGGC GGGTCACGGG GCGGCGGAGG CGGCCCGGTG A 

 

Protein sequence

MSIVAVQGVS KDYMLGKTVV PALRDVTLEI GRGEFLSIAG PSGSGKTTLL NLIGCVDTPT 
TGVVQVDGKD TSRLSERQLT DLRLRTIGFI FQSFNLVQVL SVFQNVEFPL LLQGGLSRRD 
REGRVMGLLE AVGIASHARH RPSELSGGQR QRVAVARALV TAPSLVLADE PTANLDSATG 
ENIIDLMKEM NARDGTTFVF STHDPKVMAH ASAVIRIADG RIVGREAGHG AAEAAR