Gene Adeh_3884 details

Gene Information

• Locus tag: Adeh_3884
• ID: 3886354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: -
• Start bp: 4469095
• End bp: 4471098
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 637865442
• Product: LigA
• Protein accession: YP_467085
• Protein GI: 86160300
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0668] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.47617
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGCGC ACGCCCGCCC ACCTTGGCGC GGCCCCGAGT TCGTGCTGTG CTGCCGCGCC 
GTGAACGCCT CGCGAAAGCT GACGATCCTC CTACTCGTGC TGCTCCTCGG CGCCGCCAGC 
GCCGGGATCT TCCTCACGCG CGATCGCGGC GCTCCCGATG CGAACGCGGG CGGCGCGGCT 
CCGGCGGGCG CGCCGGCCCC CGCAGCGGCG CCAGGCGCCG GGCAGGCGGG CGCGGGGGGG 
CAGGGCGGCG GGCAGGTGCA GCCCGGCGGC CAGCGCCCCC GGCGCACCCG GCTCGTGGAC 
ATGCGGCCGC TCCTCACCGC GAAGCAGCTC TCCGCGTTCG CGAGCACGCC CGAGGAGCAG 
GAGCTCTCCC GCCAGGCCGA GCGGCTCGCC GACCACGCCA TCGACCTCGC GTTCGCGGTG 
GCGATGCGCG ACGCCGCCGA GAGCGTGCCC GAGCAGACGC CGGAGCTGAA GGCGCTCGCC 
GACGCGCGGG CCCGGGCGCA GGCTGCGGTG GACGCGGCCG AGGGGCGGGT GGCCGCGCTC 
GAGGCGAGGG TGAAGGCCGC GCCGGAGCGC GAGCGCGTCG AGCTGGAGGA TCAGCTCGAG 
GTCGCGCGGG CCGAGCTGGA GCTCGAGAAC AACGAGCTCG CCTCCGCGAC CGATCAGCTC 
CAGCGCGCCG GCGGCGATCC GCAGGTGCGC ATCCGCCGCC TGCGCGAGGT GTACGACGCC 
GCGCAGAAGG AGCCGCGGCC GCCGGTCGCG GCGGCGCCCG CGACCGCGCC GAGCCTGCTC 
TCGCGCTGGC GGGGGTGGAG CTGGCACCGC GCCAAGGCGG CGCAGCTCGC GGCCGCGCAG 
GCCGACGTCC AGGATCGCGC GCAGCGGCTC GCGAAGCGGC GCGACGACCT CGTCGCGCGC 
AAGAAGCGCG AGGCCGAGGA GCGCGAGGCC GCGAAGGCGT CCGCCGCGCG GGTGGCCGCC 
GGCGAGGCGG CCGCGGCCGA CCGGGCCGCG AAGGCCGAGG CGGTGAAGGC GCTCCAGCGC 
TTCAGCGACG ACCAGCGCCG GCTCGCCACG ATCGGGCGGC GCCTGCAGGA CCTGAACGAG 
CTCGCCGACA CCTACGGCCA GTGGCGCGAG GTGGTGCAGG GCCACGCCCG CGCCGCGCTG 
CACCGGCTGC TGTGGGGCGT GCTGGCCTTG CTCGCGGTGG TGGCGGCCGG GTTCGGGCTG 
GGCGAGGTGG TGGACCGGTT CTTCCGCAAG CGCGCGAAGG AGCGGCTGCG GGTCGAGACC 
GTGCGCACGG TCGCGCGCCT CGGCGTGAAC GTGGTGACGG TGCTCGTGGC GCTGTTCGTC 
GTGTTCGGCG CGCCCGGGCA GGCCACCACC GTCCTCGGCC TCGCCGGCGC CGGCCTCACC 
GTCGCGCTGA AGGACTTCAT CGTCGCGTTC TTCGGCTGGT TCATCCTCAT GGGCCGCAAC 
GGCATCCGCG TGGGCGACTG GGTGGAGATC AAGGGCGTGG GCGGCGAGGT GGTGGAGATC 
GGCCTGTTCC ACACCGTGCT GCTCGAGACC GGGAGCTGGA ACGACGCCGG CCACCCCACC 
GGCCGCCGCG TGTCGTTCGT GAACTCGTTC GCCATCGAGG GCCACTACTT CAACTTCTCC 
ACCTCCGGCC AGTGGATGTG GGACGAGCTG CGGCTGCTCG TGCCGCTCGG CCGCGACCCG 
TACCCGGTCA TCGACGGCGT GCAGCACCTG GTCGAGAAGG AGACCGAGGC GAACGCGAAG 
GCGGCGGAGG GCGAGTGGCG GAAGACCACC TCGCGCTACG CCGTGCAGAG CTTCTCGGCC 
GTGCCCGGCA TCCAGGTGGT GCCCGCCGCG AACGGCATGG AGGTGGTGGT CCGGTACATC 
ACCCGCGCCA GCCAGCGCCA CGACGCGCGC CAGCGCCTGT ACCGCGCCGT GCTCGAGCTG 
ATGCACGGGA AGCGCGGGGA CGCGGGGCAA GGGAGCCCGG GCGGTCCGGC CGGGCCGGGC 
GAGGCGCGCG GCGGGGCGCG CTGA 

 

Protein sequence

MRAHARPPWR GPEFVLCCRA VNASRKLTIL LLVLLLGAAS AGIFLTRDRG APDANAGGAA 
PAGAPAPAAA PGAGQAGAGG QGGGQVQPGG QRPRRTRLVD MRPLLTAKQL SAFASTPEEQ 
ELSRQAERLA DHAIDLAFAV AMRDAAESVP EQTPELKALA DARARAQAAV DAAEGRVAAL 
EARVKAAPER ERVELEDQLE VARAELELEN NELASATDQL QRAGGDPQVR IRRLREVYDA 
AQKEPRPPVA AAPATAPSLL SRWRGWSWHR AKAAQLAAAQ ADVQDRAQRL AKRRDDLVAR 
KKREAEEREA AKASAARVAA GEAAAADRAA KAEAVKALQR FSDDQRRLAT IGRRLQDLNE 
LADTYGQWRE VVQGHARAAL HRLLWGVLAL LAVVAAGFGL GEVVDRFFRK RAKERLRVET 
VRTVARLGVN VVTVLVALFV VFGAPGQATT VLGLAGAGLT VALKDFIVAF FGWFILMGRN 
GIRVGDWVEI KGVGGEVVEI GLFHTVLLET GSWNDAGHPT GRRVSFVNSF AIEGHYFNFS 
TSGQWMWDEL RLLVPLGRDP YPVIDGVQHL VEKETEANAK AAEGEWRKTT SRYAVQSFSA 
VPGIQVVPAA NGMEVVVRYI TRASQRHDAR QRLYRAVLEL MHGKRGDAGQ GSPGGPAGPG 
EARGGAR