Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3789 |
Symbol | |
ID | 3888286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 4341948 |
End bp | 4343666 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637865346 |
Product | peptidoglycan-binding lytic transglycosylase |
Protein accession | YP_466992 |
Protein GI | 86160207 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.145262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCAGA TCCGCACGAC CTTCCTAGCC GTTTGCGCGC TCGCCCTCCC CGGGCCGGGC CGCGCCCAGG GCCCCGTCAC GCGGGCCGCC ACCGTCGAGG CCGCCGCCCA GGCCCTGCCC GCCGCCGACG TCCCGGAGGC GCAGATCGTC GCGCCGCCGA AGCCGGCGCA GCGTCGCCAG GAGCCGTCGG TGGACGACGT GATCGCGAAC GCGGACGCGC CCGACGAGCC GGCCATCGCG GAGGAGATCG AGCAGGAGTC CGCCGAGCTC GAGGACCTGC GCCAGGCCGA GGAGGCGTCG CGGGTGCAGG ATCGCGGCGA CGGCCGCCGC GCGGTCGGCG CCGACGGGCT CGGGCTCGAG TCCCCCATCC GCGACCGGGT GGAGGGCGCG CTGGGCCGCG ACGCCACGCC GCGGGGCGAG GGCGCCGGGC GGATCCCGCT GCTGCCCGAG ATCGACCACG ACCTCGCCAC GCTCCAGGCC GAGTACGACA TCCCCATCGA CGTGAACGAG GCGGTGGTCG CGTACGTCCG CTTCTTCCAG TCGCCCAGCG TCCGCGCCCA CTTCGTGAAG TGGCTCGGGC GCTCGCACCG CTACATGGAG CGGTACCGGC AGATCCTGAA GGAGGAGGGG CTGCCGCAGG ACACGGTCTT CCTCGCGATG ATCGAGAGCG GCTTCGGCAA CTTCGCCTAC AGCCGCGCGA AGGCGTCGGG CCCCTGGCAG TTCATCGCCG CGACCGGCAA GAGCTACGGC CTGAAGCAGG ACTTCTGGGT GGACGAGCGG CGCGATCCGG AGCGCTCCGC GCGCGCCGCC GCCCGGTTCC TGAAGCGGCT GCGCGAGCAG ACCGGCGACT GGCGGCTGGC GTGGGCCGGC TACAACGCCG GCGCCGGCCG CGTGCTGGCC GCGCAGCGGA TGGGCTACGA CGACTTCTGG GAGATGGCGG ACGTCCCCGG CAAGAAGGTG CTCCGGGCCG AGACCAAGGG CTACGTGCCG AAGCTGATGG CCGCCGCCAT CATCACCAAG CACCACGAGG CGTTCGGGTT CCGGCAGGAC GAGATCGATC GGCAGGCGTG GACGGAGTAC GAGGAGGTGG ACGTCCCCGA CGCCACGCTG CTCACCGTCA TCGCGCGCGC GGCCGGCGTC TCCGAGAAGG ACATCATCGA CCTCAACCCC GAGCTGCGCC GCGCCTGCAC GCCGCCCCGC CCGTACAAGA TCAAGATCCC GGCCGAGCGC GCCCAGGCGT TCGCCGAGGC CTGGCCGGCG CTCCGCGCCA GGACCCGCCT CACCTTCGCC GGGCACGTGG TCCGCCGCGG CGACAGCATC GGCCGCATCG CGCAGCGCTA CGGCGTGCCG GCCCAGGGCA TCCTGGAGAT GAACGGGCTG AAGAACGCGC GGAAGCTGCG CGTCGGCACG GAGCTGATCA TCCCGCGGCC GGCCGCCGGG GTGGCCGTGG CCGCGCGCGC GCCGGAGCCC GAGTCGCGCC GCACGGCCGC CGCCGAGCGC GCCGCGCCCG CCCCGGTGCG GACCGCCTCC GCGGCCGCGC CGGCCGCGAG GCCCGCGCAC CAGACGCTCC GCGTCCGCGC CGGCGACACG CTCTGGTCAA TCGCGCAGCG GTTCGGCGTC GAGCTCCAGG ACCTGTGCCG CTGGAACGGG ATCAAGAACC CGCGCAGCCA CAAGCTGATG GTGGGCGCGA TGATCGTGGT GCGGCCCGGG CGCGGGTAG
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Protein sequence | MRQIRTTFLA VCALALPGPG RAQGPVTRAA TVEAAAQALP AADVPEAQIV APPKPAQRRQ EPSVDDVIAN ADAPDEPAIA EEIEQESAEL EDLRQAEEAS RVQDRGDGRR AVGADGLGLE SPIRDRVEGA LGRDATPRGE GAGRIPLLPE IDHDLATLQA EYDIPIDVNE AVVAYVRFFQ SPSVRAHFVK WLGRSHRYME RYRQILKEEG LPQDTVFLAM IESGFGNFAY SRAKASGPWQ FIAATGKSYG LKQDFWVDER RDPERSARAA ARFLKRLREQ TGDWRLAWAG YNAGAGRVLA AQRMGYDDFW EMADVPGKKV LRAETKGYVP KLMAAAIITK HHEAFGFRQD EIDRQAWTEY EEVDVPDATL LTVIARAAGV SEKDIIDLNP ELRRACTPPR PYKIKIPAER AQAFAEAWPA LRARTRLTFA GHVVRRGDSI GRIAQRYGVP AQGILEMNGL KNARKLRVGT ELIIPRPAAG VAVAARAPEP ESRRTAAAER AAPAPVRTAS AAAPAARPAH QTLRVRAGDT LWSIAQRFGV ELQDLCRWNG IKNPRSHKLM VGAMIVVRPG RG
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