Gene Adeh_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_3789 
Symbol 
ID3888286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp4341948 
End bp4343666 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content75% 
IMG OID637865346 
Productpeptidoglycan-binding lytic transglycosylase 
Protein accessionYP_466992 
Protein GI86160207 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCAGA TCCGCACGAC CTTCCTAGCC GTTTGCGCGC TCGCCCTCCC CGGGCCGGGC 
CGCGCCCAGG GCCCCGTCAC GCGGGCCGCC ACCGTCGAGG CCGCCGCCCA GGCCCTGCCC
GCCGCCGACG TCCCGGAGGC GCAGATCGTC GCGCCGCCGA AGCCGGCGCA GCGTCGCCAG
GAGCCGTCGG TGGACGACGT GATCGCGAAC GCGGACGCGC CCGACGAGCC GGCCATCGCG
GAGGAGATCG AGCAGGAGTC CGCCGAGCTC GAGGACCTGC GCCAGGCCGA GGAGGCGTCG
CGGGTGCAGG ATCGCGGCGA CGGCCGCCGC GCGGTCGGCG CCGACGGGCT CGGGCTCGAG
TCCCCCATCC GCGACCGGGT GGAGGGCGCG CTGGGCCGCG ACGCCACGCC GCGGGGCGAG
GGCGCCGGGC GGATCCCGCT GCTGCCCGAG ATCGACCACG ACCTCGCCAC GCTCCAGGCC
GAGTACGACA TCCCCATCGA CGTGAACGAG GCGGTGGTCG CGTACGTCCG CTTCTTCCAG
TCGCCCAGCG TCCGCGCCCA CTTCGTGAAG TGGCTCGGGC GCTCGCACCG CTACATGGAG
CGGTACCGGC AGATCCTGAA GGAGGAGGGG CTGCCGCAGG ACACGGTCTT CCTCGCGATG
ATCGAGAGCG GCTTCGGCAA CTTCGCCTAC AGCCGCGCGA AGGCGTCGGG CCCCTGGCAG
TTCATCGCCG CGACCGGCAA GAGCTACGGC CTGAAGCAGG ACTTCTGGGT GGACGAGCGG
CGCGATCCGG AGCGCTCCGC GCGCGCCGCC GCCCGGTTCC TGAAGCGGCT GCGCGAGCAG
ACCGGCGACT GGCGGCTGGC GTGGGCCGGC TACAACGCCG GCGCCGGCCG CGTGCTGGCC
GCGCAGCGGA TGGGCTACGA CGACTTCTGG GAGATGGCGG ACGTCCCCGG CAAGAAGGTG
CTCCGGGCCG AGACCAAGGG CTACGTGCCG AAGCTGATGG CCGCCGCCAT CATCACCAAG
CACCACGAGG CGTTCGGGTT CCGGCAGGAC GAGATCGATC GGCAGGCGTG GACGGAGTAC
GAGGAGGTGG ACGTCCCCGA CGCCACGCTG CTCACCGTCA TCGCGCGCGC GGCCGGCGTC
TCCGAGAAGG ACATCATCGA CCTCAACCCC GAGCTGCGCC GCGCCTGCAC GCCGCCCCGC
CCGTACAAGA TCAAGATCCC GGCCGAGCGC GCCCAGGCGT TCGCCGAGGC CTGGCCGGCG
CTCCGCGCCA GGACCCGCCT CACCTTCGCC GGGCACGTGG TCCGCCGCGG CGACAGCATC
GGCCGCATCG CGCAGCGCTA CGGCGTGCCG GCCCAGGGCA TCCTGGAGAT GAACGGGCTG
AAGAACGCGC GGAAGCTGCG CGTCGGCACG GAGCTGATCA TCCCGCGGCC GGCCGCCGGG
GTGGCCGTGG CCGCGCGCGC GCCGGAGCCC GAGTCGCGCC GCACGGCCGC CGCCGAGCGC
GCCGCGCCCG CCCCGGTGCG GACCGCCTCC GCGGCCGCGC CGGCCGCGAG GCCCGCGCAC
CAGACGCTCC GCGTCCGCGC CGGCGACACG CTCTGGTCAA TCGCGCAGCG GTTCGGCGTC
GAGCTCCAGG ACCTGTGCCG CTGGAACGGG ATCAAGAACC CGCGCAGCCA CAAGCTGATG
GTGGGCGCGA TGATCGTGGT GCGGCCCGGG CGCGGGTAG
 
Protein sequence
MRQIRTTFLA VCALALPGPG RAQGPVTRAA TVEAAAQALP AADVPEAQIV APPKPAQRRQ 
EPSVDDVIAN ADAPDEPAIA EEIEQESAEL EDLRQAEEAS RVQDRGDGRR AVGADGLGLE
SPIRDRVEGA LGRDATPRGE GAGRIPLLPE IDHDLATLQA EYDIPIDVNE AVVAYVRFFQ
SPSVRAHFVK WLGRSHRYME RYRQILKEEG LPQDTVFLAM IESGFGNFAY SRAKASGPWQ
FIAATGKSYG LKQDFWVDER RDPERSARAA ARFLKRLREQ TGDWRLAWAG YNAGAGRVLA
AQRMGYDDFW EMADVPGKKV LRAETKGYVP KLMAAAIITK HHEAFGFRQD EIDRQAWTEY
EEVDVPDATL LTVIARAAGV SEKDIIDLNP ELRRACTPPR PYKIKIPAER AQAFAEAWPA
LRARTRLTFA GHVVRRGDSI GRIAQRYGVP AQGILEMNGL KNARKLRVGT ELIIPRPAAG
VAVAARAPEP ESRRTAAAER AAPAPVRTAS AAAPAARPAH QTLRVRAGDT LWSIAQRFGV
ELQDLCRWNG IKNPRSHKLM VGAMIVVRPG RG