| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2906 |
|---|
| Symbol | |
|---|
| ID | 3890214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3281282 |
|---|
| End bp | 3282856 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 637864456 |
|---|
| Product | Alpha amylase, catalytic region |
|---|
| Protein accession | YP_466113 |
|---|
| Protein GI | 86159328 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCC GCACGTTCCG TCCGCCACCT CGCCTGGCCG CCCTGCTGGC GCTCCTCTGC
ATCGCGCCGC TGCGCGCGGG CGCCGACGTC CGGCCGGATC CGGAGTGGTA TCGCAGCGCG
GTGATCTACG GCGTCGTCCC GCCGCGCTTC GGCCCCGAGC CGCTGAAGGC GGTGACCGCG
CGCCTCGACG CCCTCCGCGA CCTCGGCGTG GACGCGCTCT GGCTCGCGCC CGTCAACCCG
ACCGACGATC CCGGGGACGT CAGCTACGCC ATCACCGACT ACTTCGGCCT GCGGGCCGAC
TTCGGCACGC CCGAGGACCT CCGGGCGCTC GTCCGCGAGG CGCACGCGCG CGGCATCCGC
GTGCTCCTCG ACTTCGTCCC CAACCACACC TCGGTCGGCC ACCCGCACCA CCTCGACGCG
GCGGCGCGGG GCCGGGCGTC GCCGTGGTGG GGCTGGTACG ACCGCGATCC GGCGGGCCGC
GAGACGCACT ACTTCGACTG GAAGCACCTG CCGAACCTCG ACTACGGGAA CCCGCTGGTG
CGGCAGATGA TGCTGGACGC GTTCGCGTTC TGGGTCCGCG AGTACGACGT GGACGGCTTC
CGCGTGGACG CGGCCTGGGG GATCCGCCAG CGCGCGCCCG CGTTCTGGGG GGCGCTGCGC
CGCCGGCTCG ACGCGGTGAA GCCGGGCGTG TTCCTGCTCG CCGAGGCGAG CGCGCGCGAC
CCGTTCTACG TCCGCAACGG CTTCGACGCG GCCTACGACT GGACCGGCGA GCTGGGCCAC
TGGGCCTGGG AGAAGGTCTT CGACGATCCC GCGCGCATCG GGCCGGCGCT CGACGCCGCG
CTGGCGTCGC GCCGGACGCC GATGCACCGG GTGGCCCGCT TCCTGAACAA CAACGACACC
GGCGAGCGCT TCGTGACCCG CCACGGCCTC GCCGTGACCC GCGTCGCCGC GGTGCTCCTG
CACGCGCTGC CCGGCATCGC GGTGGTCTAC ACCGGCGACG AGGTCGGCGC GGAGTTCCAG
CCCTACGAGG AGGGGCCGCC GGTCTCGTGG GTGGACGTCC ACGGGCTCCG TCCGCTGTAC
CGGCGGCTGG CCGCGCTCCG CGAGGACCTG CCGGCGCTCC GGCGTGGCAC CTACCGGCGC
GTCGCGGTCC CGGGGCACCC GGAGGCGTTC GCGTTCCTGC GCGACGCCGG GGCGGCGGGC
CGCGCGCTGG TGGTGCTGAA CTTCGGCGGC CCGGCCCGGC TTCGCCTGGA CGCGCCCGCG
GGCGCGCTGC CGGGCTGGGA CGCGATCTCG CAGCGCCCGG CGGCGGTGCG CCGCGCCGGT
CCCGGCGCGC TCGAGCTCGA GGTGGGCGGC CAGCAGGCCC TGATCCTGGT GGACCGCGCC
AGCCCGCGCC GAGCGCGGCC TACGCCTCCT CCGACCCCGG GCCGCTCCCC TCCGGCGGCG
TGCCGCGCGC GCGACGCCGG TCGAGGAGGT CGGCGGCCAG CCAGCACGCG ACCGCCCAGC
TCCCGCCGAC GGCCCACCCG GCGATCACGT CGGTGGGCCA GTGCACGCCC AGGTACACCC
GGCTCGCGCC GGTGA
|
|---|
| Protein sequence | MRARTFRPPP RLAALLALLC IAPLRAGADV RPDPEWYRSA VIYGVVPPRF GPEPLKAVTA
RLDALRDLGV DALWLAPVNP TDDPGDVSYA ITDYFGLRAD FGTPEDLRAL VREAHARGIR
VLLDFVPNHT SVGHPHHLDA AARGRASPWW GWYDRDPAGR ETHYFDWKHL PNLDYGNPLV
RQMMLDAFAF WVREYDVDGF RVDAAWGIRQ RAPAFWGALR RRLDAVKPGV FLLAEASARD
PFYVRNGFDA AYDWTGELGH WAWEKVFDDP ARIGPALDAA LASRRTPMHR VARFLNNNDT
GERFVTRHGL AVTRVAAVLL HALPGIAVVY TGDEVGAEFQ PYEEGPPVSW VDVHGLRPLY
RRLAALREDL PALRRGTYRR VAVPGHPEAF AFLRDAGAAG RALVVLNFGG PARLRLDAPA
GALPGWDAIS QRPAAVRRAG PGALELEVGG QQALILVDRA SPRRARPTPP PTPGRSPPAA
CRARDAGRGG RRPASTRPPS SRRRPTRRSR RWASARPGTP GSRR
|
|---|
| |