Gene Adeh_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_2378 
Symbol 
ID3889517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand+ 
Start bp2682884 
End bp2683528 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID637863917 
Productsigma-24 (FecI-like) 
Protein accessionYP_465585 
Protein GI86158800 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.294545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACC TCCGACAGAA CGACCTGACC CGCGACGAGT TCCAGGAGCT CGCGCTCAAG 
CACATCGACC CCCTCTACTC GGCGGCGCTG CGGCTCACGA AGAACGACCG CGACGCCGAG 
GACCTGGTCC AGGACACGTT CCTGCGCGCC TACCGCTTCT TCGACAAGTT CGAGCGCGGC 
ACCAACATCA AGGCGTGGCT GTTCAAGATC CTGACCAACA CCTTCATCAA CCGGTATCGA 
CGGTCGGTGA AGGAGCGCAA CATCGTCGAG GGGTCGGAGC GCGACGCCGT GCACGAGCGG 
TTCGTGTCGC GCGAGGCGGC CGAGTACGCG GCCAACCCGG AGCAGTACTT CTTCGACCGG 
CTCCTCTCCG ACGACGTCCT GAAGGCGGTG GACTCGCTGC CCATCGACTT CCGGATGGTC 
GTGATCCTCG CGGACCTGCA GGAGTTCTCG TACAAGGAGA TCGCCGAGAT CCTCGACGTC 
CCGGTGGGCA CGGTGATGAG CCGGCTGTAC CGTGGACGCC GGCTGTTGCA GAAGGCGCTG 
GCGAGCTACG CCGTGGTCTC CGGGGTGATC CAGCTGCCGG AGTCCGACGA CGGCGAGAGC 
ATCGACCTCG AGACGTACCG GCGCCGCCGC GGCAAGTCGG CCTAG
 
Protein sequence
MFDLRQNDLT RDEFQELALK HIDPLYSAAL RLTKNDRDAE DLVQDTFLRA YRFFDKFERG 
TNIKAWLFKI LTNTFINRYR RSVKERNIVE GSERDAVHER FVSREAAEYA ANPEQYFFDR 
LLSDDVLKAV DSLPIDFRMV VILADLQEFS YKEIAEILDV PVGTVMSRLY RGRRLLQKAL 
ASYAVVSGVI QLPESDDGES IDLETYRRRR GKSA