Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1592 |
Symbol | rpoB |
ID | 3887841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1819746 |
End bp | 1824014 |
Gene Length | 4269 bp |
Protein Length | 1422 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637863128 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_464802 |
Protein GI | 86158017 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.657994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGA CGATTCAGAA CAACTTCCGG ATCCGGCGGA ACTTCGGGAA GATCAACAAG ATCGCCGAGA TCCCCAACCT CATCGCCATC CAGAAATTCT CCTACGACAA GTTCTTGCAG GCCGACGTCC CGCCCGAGAA GCGGGACGAT ACCGGTCTCC AGGGGGTCTT CAAGTCCGTC TTCCCCATCA AGGACTTCAA CGAGACCAGC TCGCTCGAGT TCGTGAGCTA CCACCTCGAG AAGCCCAAGT ACGACGTGGA CGAGTGCCAC CAGCGCGGGA TGACGTACTC CGCGCCGATC AAGGTGGTCG TCCGCCTGGT CGTCTGGGAC AAGGACGAGG AGACGGGCGC GCAGTCCATC CGCGACGTCA AGGAGCAGGA GGTCTACTTC GGCGAGATCC CGCTCATGAC GGAGAACGGG ACCTTCATCA TCAACGGGAC CGAGCGCGTC GTCGTCAGCC AGCTCCACCG CTCCCCGGGC GCGTTCTTCG ACCACGACAA GGGCAAGAGC CACTCGTCCG GCAAGCTGCT CTACAACGCC CGGATCATCC CGTACCGCGG CTCGTGGATC GACTTCGAGT TCGATCACAA GGACATCCTC TACGTCCGCA TCGACCGGCG CCGCAAGCTG CCGGCCACGG TGCTGCTGCG CGCGCTCGGC GCGACGCCGG ACACGGCCAA GAAGGACCCG GTGGAGTTCC ACGGGTCGGC CGAGGAGATC CTCAAGTACT ACTACGACAC CGAGACGATC CGGGTGGAGG GGAAGGGCAA GTTCGAGAAG GACCTCGTCC CCGACCTGCT CAAGGGCCAG CGCGCCACGC GCGACATCCG CGATCCCAAG TCGAGCGAGG TGATCGTCAA GAAGAACCGC AAGTACACCG AGAGCGCGAT CAAGAAGCTG GTCGCGGCGA AGATGAAGTC GCTCCCGGTG GAGCCGGAGG AGGTCTACAC CAAGATCTCC GCCGAGGACG TGGTGGACGA GACCACGGGC GAGGTGCTCC TCGAGGTGAA CGAGGAGGTC ACCGAGGCCA AGGTCGAGGA GCTGCGCAAG CGGAACATCA ACGAGTTCAA GGTCCTCTTC ATCGACAACC TGAACATCCT GCCCGCGCTC CGCGACACGC TCATGCAGGA CAAGATCTCC ACGCCGGAGG AGGCGATCAT GGAGATCTAC CGCCGCCTCC GCCCCGGCGA CCCGCCGACG CCGGAGACCG CGACGAACCT CTTCGTCAAC CTGTTCTTCA ACGCCGAGCG CTACGACCTG TCGAAGGTCG GCCGCCTCAA GCTGAACTAC AAGTTCGGCA TCGAGGAGCC GCTCGAGAAC ACGGTCCTCA CCAAGCGCGA CATCCTCGAG GTCGTCCGCT TCCTCATCGA CCTCAAGAAC GGCAAGCCGA ACAAGGACGT GGACGACATC GACCACCTCG GCAACCGCCG CGTCCGCGCG GTGGGCGAGC TGCTCGAGAA CCAGTACCGC ATCGGCCTGG TGCGCATGGA GCGGGCGATC AAGGAGCGCA TGAGCCTCCA GGAGATCGAG ACGCTCATGC CGCACGACCT GATCAACGCG AAGCCGGTGA CCGCGGTGAT CAAGGAGTTC TTCGGGTCGA GCCAGCTCTC GCAGTTCATG GACCAGACGA ACCCGCTCTC CGAGGTCACG CACAAGCGGC GCCTCTCGGC CCTCGGGCCG GGCGGCCTGA CCCGCGAGCG CGCCGGCTTC GAGGTGCGCG ACGTCCACTC CACGCACTAC GGCCGCATCT GCCCGATCGA GACGCCGGAA GGCCCGAACA TCGGCCTGAT CGCGTCGCTG TCCACCTACG CCCGCGTGAA CGAGTACGGC TTCGTCGAGA CGCCGTACCG CAAGGTGGAG AAGGGCCGGG TGACCGACGA GGTGACCTTC TACTCCGCGC TCGAGGAGGA GAAGCACATC ATCGCCCAGG CGAACGCGCC GGTGGACAAG AAGGGCAACT TCACCGAGGC GAAGGTCTGG TGCCGCAAGG AGGGCGAGTA CATCTACGTC CGCCCGGACG AGGTGGACCT GATGGACGTG AGCCCGAACC AGCTCGTGTC CGTGGCCGCC TCGCTGGTGC CGTTCCTCGA GAACGACGAC GCGAACCGCG CGCTCATGGG CTCGAACATG CAGCGCCAGG CGGTGCCGCT GCTCCGCACC CAGGCGCCGC TGGTGGGCAC CGGCATCGAG GCCATCGTGG CCCGCGACTC CGGCGTGACC ACGGTCGCGA AGCGCGACGG CGTGGTGCAG TCGGTGGACG CCTCGCGCAT CGTGGTGAAG GCCGACGTGC CGACCTCGGC GACCGACGTC GCCAACGAGG TCGACATCTA CAACCTCATC AAGTACCAGC GCTCCAACCA GAACACCTGC ATCAACCAGA AGCCCATCGT GAAGCCGGGC GAGCGGGTGC GGAAGGGCGA CGTCATCGCC GACGGCCCGG CCACCGAGAT GGGCGAGCTC GCGCTCGGCC AGAACGTGGT GGTCGCGTTC ATGCCGTGGC AGGGCTACAA CTTCGAGGAC TCCATCCTCC TCTCCGAGCG CCTCATCAAG GAGGACGTGT TCACGTCGGT GCACATCGAG GAGTTCGAGT GCGTCGCGCG CGACACCAAG CTCGGCAAGG AGGAGATCAC CCGGGACATC CCGAACGTCG GCGAGGAGGC CCTCAAGGAC CTCGACGAGT CCGGCATCAT CCGCATCGGC GCCGAGGTGA AGCCCGGTGA CATCCTGGTC GGCAAGATCA CGCCGAAGGG CGAGACCCAG CTCTCGCCGG AGGAGAAGCT CCTCCGCGCC ATCTTCGGCG AGAAGGCCGG CGACGTCCGC GACAGCTCGC TGCGCGTGCC GCCGGGCGTC TCCGGCACGG TGATCAACGC CAAGGTGTTC AGCCGCAAGG GCGTCGAGAA GGACGAGCGC GCCAAGGCCA TCGAGGAGAT GGAGGAGGCG AAGCTCCTCA AGGACCAGAA CGACGAGATC CGCATCATCC AGGACTCGGC GTTCCAGAAG ATCCGCCGCC TGCTCCTCGG CAAGGAGGTC ACGGCCCGCC TGGTGGACGA CAAGGGCGAG CAGCTCCTGA AGAAGGGCGA CGTCCTCGAC GACGCGCTGC TCGACACCGT CCCGCAGCGC TACTGGGGCG AGATCGCCGT CGCCGGCGAC GTGCAGGACC TGGCGCGGAA GATCATCGAC AACTTCGAGG AGCAGAAGGA GCTCGTGAAG CTGCTCTTCG GCGAGAAGAT CGGCCGCCTG AAGAAGGGCG ACGAGCTGCC GCCGGGCGTC ATCAAGATGG TGAAGGTGTA CGTCGCCATC AAGCGCAAGC TGGCCGTCGG CGACAAGATG GCCGGCCGCC ACGGCAACAA GGGCGTGGTC TCGCGCGTGC TGCCCGAGGA GGACCTGCCG TACCTCGAGG ACGGCACCCC GGTGGACATC GTGCTCAACC CGCTCGGCGT GCCGTCGCGC ATGAACGTCG GGCAGATCCT CGAGACGCAC CTGGGCTGGG CCGCGCGCAA CGTCGGCCTC CGGCTGCAGG AGATGATCGA GAAGGAGTAC GGCCCCGAGC AGCTGCGCAA GAAGCTCCGC GCCGCGTTCG CCGGCACCGA GGGCGGCCCC GCCAGCGATC GGCTGGCCGC GCTCATCGAC GACGTGCCCG AGAAGGAGCT GCCGAAGCTG GCGCAGAAGC TCCGCCGCGG CATGCACGTC GCGACCCCGG TGTTCGACGG CGCCCGCGAG GACGAGATGA AGGCCCTCAT GGAGGAGGGC TCCGCGACGC TGCAGTCGAT CCTGTTCGAC GGCCGCACCG GCGAGCCGTT CGACCAGGAC GTGACGGTGG GCGTCATGTA CATGCTGAAG CTGCACCACC TCGTGGACGA GAAGATCCAC GCCCGGAGCA TCGGGCCGTA CTCGCTCGTC ACGCAGCAGC CGCTGGGCGG CAAGGCCCAG TTCGGCGGCC AGCGCCTGGG CGAGATGGAG GTCTGGGCGA TGGAGGCCTA CGGCGCGGCC TACTCGCTCC AGGAGTTCCT CACGGTGAAG TCCGACGACG TGGTCGGCCG CACCCGCATG TACGAGGCGA TCGTCAAGGG CGAGAACACG CTCGAGTCCG GGCTGCCCGA GTCGTTCAAC GTGCTCATCA AGGAGCTCCA GAGCCTCGCG CTCGACGTGG AGCTGCTCGA GACGCCGGAG GCGCAGGCGG CGCGCGAGGC CGCCGAGCGC GACCTCGGCG GCGGCCCGCT GGGCGCGCCG CGCGGCGCGG TCGCGTCGGG GGAGAAGAGC AGCGCGTAG
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Protein sequence | MATTIQNNFR IRRNFGKINK IAEIPNLIAI QKFSYDKFLQ ADVPPEKRDD TGLQGVFKSV FPIKDFNETS SLEFVSYHLE KPKYDVDECH QRGMTYSAPI KVVVRLVVWD KDEETGAQSI RDVKEQEVYF GEIPLMTENG TFIINGTERV VVSQLHRSPG AFFDHDKGKS HSSGKLLYNA RIIPYRGSWI DFEFDHKDIL YVRIDRRRKL PATVLLRALG ATPDTAKKDP VEFHGSAEEI LKYYYDTETI RVEGKGKFEK DLVPDLLKGQ RATRDIRDPK SSEVIVKKNR KYTESAIKKL VAAKMKSLPV EPEEVYTKIS AEDVVDETTG EVLLEVNEEV TEAKVEELRK RNINEFKVLF IDNLNILPAL RDTLMQDKIS TPEEAIMEIY RRLRPGDPPT PETATNLFVN LFFNAERYDL SKVGRLKLNY KFGIEEPLEN TVLTKRDILE VVRFLIDLKN GKPNKDVDDI DHLGNRRVRA VGELLENQYR IGLVRMERAI KERMSLQEIE TLMPHDLINA KPVTAVIKEF FGSSQLSQFM DQTNPLSEVT HKRRLSALGP GGLTRERAGF EVRDVHSTHY GRICPIETPE GPNIGLIASL STYARVNEYG FVETPYRKVE KGRVTDEVTF YSALEEEKHI IAQANAPVDK KGNFTEAKVW CRKEGEYIYV RPDEVDLMDV SPNQLVSVAA SLVPFLENDD ANRALMGSNM QRQAVPLLRT QAPLVGTGIE AIVARDSGVT TVAKRDGVVQ SVDASRIVVK ADVPTSATDV ANEVDIYNLI KYQRSNQNTC INQKPIVKPG ERVRKGDVIA DGPATEMGEL ALGQNVVVAF MPWQGYNFED SILLSERLIK EDVFTSVHIE EFECVARDTK LGKEEITRDI PNVGEEALKD LDESGIIRIG AEVKPGDILV GKITPKGETQ LSPEEKLLRA IFGEKAGDVR DSSLRVPPGV SGTVINAKVF SRKGVEKDER AKAIEEMEEA KLLKDQNDEI RIIQDSAFQK IRRLLLGKEV TARLVDDKGE QLLKKGDVLD DALLDTVPQR YWGEIAVAGD VQDLARKIID NFEEQKELVK LLFGEKIGRL KKGDELPPGV IKMVKVYVAI KRKLAVGDKM AGRHGNKGVV SRVLPEEDLP YLEDGTPVDI VLNPLGVPSR MNVGQILETH LGWAARNVGL RLQEMIEKEY GPEQLRKKLR AAFAGTEGGP ASDRLAALID DVPEKELPKL AQKLRRGMHV ATPVFDGARE DEMKALMEEG SATLQSILFD GRTGEPFDQD VTVGVMYMLK LHHLVDEKIH ARSIGPYSLV TQQPLGGKAQ FGGQRLGEME VWAMEAYGAA YSLQEFLTVK SDDVVGRTRM YEAIVKGENT LESGLPESFN VLIKELQSLA LDVELLETPE AQAAREAAER DLGGGPLGAP RGAVASGEKS SA
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